Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

C6XGM1

- C6XGM1_LIBAP

UniProt

C6XGM1 - C6XGM1_LIBAP

Protein
Submitted name:

Alpha-ketoglutarate decarboxylase

Gene

kgd

Organism
Liberibacter asiaticus (strain psy62)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 28 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
    2. thiamine pyrophosphate binding Source: InterPro

    GO - Biological processi

    1. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseImported

    Enzyme and pathway databases

    BioCyciLASI537021:GHEM-983-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-ketoglutarate decarboxylaseImported (EC:1.2.4.2Imported)
    Gene namesi
    Name:kgdImported
    Ordered Locus Names:CLIBASIA_04765Imported
    OrganismiLiberibacter asiaticus (strain psy62)Imported
    Taxonomic identifieri537021 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeCandidatus Liberibacter
    ProteomesiUP000002744: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi537021.CLIBASIA_04765.

    Structurei

    3D structure databases

    ProteinModelPortaliC6XGM1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0567.
    HOGENOMiHOG000259588.
    KOiK00164.
    OMAiGFTTAPH.
    OrthoDBiEOG6V1M1F.

    Family and domain databases

    Gene3Di3.40.50.970. 2 hits.
    InterProiIPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view]
    PANTHERiPTHR23152. PTHR23152. 1 hit.
    PfamiPF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTiSM00861. Transket_pyr. 1 hit.
    [Graphical view]
    SUPFAMiSSF52518. SSF52518. 2 hits.
    TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C6XGM1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLQDLNKMFS LSSFLDGTNC CYIEDLYKSY QEDPSSVCKD WYPLFSFLDE    50
    NSEEYDNLED GIASFLKEES VASAVFSQKK SAVESSCSLG ETQSVKDFFQ 100
    VMKMIDAYRS YGHFKANIDP LGYNSHQKDL SELSPAHYGF VKADYDRKIC 150
    MKGVLGLESA TIPEIVDVLS HLYCSNIGVE FMHIVDSIER DWVRNTIEDY 200
    DFSSNFSKEE QRDILDKLVR AEGFEKFIDI KYKGAKRFGA DGSEVIIPAI 250
    EEIIRQGVQQ GVDEMILGMA HRGRLNVLSQ IMNKLPRSIF YEFKGKGPSE 300
    KEYSGDVKYH LGLCCNRQIC GKDVKLLLQS NPSHLEFVDP VVIGSVRARQ 350
    DLKAGIVGEK SISLVERSRV LPLIIHGDAA FAGQGIVSET FGLSGLSGYT 400
    VAGNIHLIIN NQIGFTTNPS SARSCTYASD ISKSIGIPIF HVNGDDPEAV 450
    IRVVRMAVSF RMKFHKSVVI DIVCYRRFGH NEGDEPSFTQ PMMYKTIRSH 500
    KSVLQLYADS LMKNQVISKQ ELQSLANNWH KYLEAEYKES ESYCPEKLGL 550
    LHNGENERKN SVSKEILKKI GSSIIRLPKS FNTHKIVERL MANRQKMIET 600
    GKGIDWSMAE SLAFGSLCYE GYKVRLSGQD CERGTFSHRH AILCDQETGK 650
    RYFPLGNISK DQGHCEVVNS FLSEQAVLGF EYGYSLNNLN ALTIWEAQFG 700
    DFANGAQVIL DQFITAGEQK WLCTSNLVCL LPHGYEGQGP EHSSARLERF 750
    LQMCAENNMY VANCTSPANY FHILRRQIYD RSSRPLIMMA PKSLLRHKRV 800
    VSSLSDMTCG SVFQAVLSDD AEYHGKTSVK LKEDSHIRRV ILCTGKVYYD 850
    LLDNRDMRNI ADIYLLRIEQ LYPFPEDYLI KVLSRFVQAE IVWCQEEPQN 900
    MGAWTFIEPY LEKVLHSIGA DYSRVRYVGR LPSASTAVGH MSRHLEQLSS 950
    FIEDALK 957
    Length:957
    Mass (Da):108,382
    Last modified:September 22, 2009 - v1
    Checksum:i6C10728192F7FD5D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001677 Genomic DNA. Translation: ACT57524.1.
    RefSeqiYP_003065464.1. NC_012985.3.

    Genome annotation databases

    EnsemblBacteriaiACT57524; ACT57524; CLIBASIA_04765.
    GeneIDi8210074.
    KEGGilas:CLIBASIA_04765.
    PATRICi31989080. VBICanLib64949_0986.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001677 Genomic DNA. Translation: ACT57524.1 .
    RefSeqi YP_003065464.1. NC_012985.3.

    3D structure databases

    ProteinModelPortali C6XGM1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 537021.CLIBASIA_04765.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACT57524 ; ACT57524 ; CLIBASIA_04765 .
    GeneIDi 8210074.
    KEGGi las:CLIBASIA_04765.
    PATRICi 31989080. VBICanLib64949_0986.

    Phylogenomic databases

    eggNOGi COG0567.
    HOGENOMi HOG000259588.
    KOi K00164.
    OMAi GFTTAPH.
    OrthoDBi EOG6V1M1F.

    Enzyme and pathway databases

    BioCyci LASI537021:GHEM-983-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.970. 2 hits.
    InterProi IPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view ]
    PANTHERi PTHR23152. PTHR23152. 1 hit.
    Pfami PF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTi SM00861. Transket_pyr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52518. SSF52518. 2 hits.
    TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of citrus huanglongbing bacterium, 'Candidatus Liberibacter asiaticus' obtained through metagenomics."
      Duan Y., Zhou L., Hall D.G., Li W., Doddapaneni H., Lin H., Liu L., Vahling C.M., Gabriel D.W., Williams K.P., Dickerman A., Sun Y., Gottwald T.
      Mol. Plant Microbe Interact. 22:1011-1020(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Psy62Imported.
    2. "Diversity and plasticity of the intracellular plant pathogen and insect symbiont, 'Candidatus Liberibacter asiaticus', revealed by hyper variable prophage genes with intragenic tandem repeats."
      Zhou L., Powell C.A., Hoffman M.T., Li W., Fan G., Liu B., Lin H., Duan Y.
      Appl. Environ. Microbiol. 77:6663-6673(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: psy62Imported.

    Entry informationi

    Entry nameiC6XGM1_LIBAP
    AccessioniPrimary (citable) accession number: C6XGM1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 28 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3