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C6XF74

- C6XF74_LIBAP

UniProt

C6XF74 - C6XF74_LIBAP

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Protein

Holliday junction ATP-dependent DNA helicase RuvA

Gene
ruvA, CLIBASIA_02200
Organism
Liberibacter asiaticus (strain psy62)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB By similarity.UniRule annotation

Catalytic activityi

ATP + H2O = ADP + phosphate.UniRule annotationSAAS annotations

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: UniProtKB-KW
  3. four-way junction helicase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: UniProtKB-KW
  2. DNA repair Source: UniProtKB-KW
  3. SOS response Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

HelicaseUniRule annotationSAAS annotationsImported, Hydrolase

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotationSAAS annotations, DNA repair, SOS responseUniRule annotationSAAS annotations

Keywords - Ligandi

ATP-binding, DNA-bindingUniRule annotationSAAS annotations, Nucleotide-binding

Enzyme and pathway databases

BioCyciLASI537021:GHEM-680-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Holliday junction ATP-dependent DNA helicase RuvAUniRule annotation (EC:3.6.4.12UniRule annotation)
Gene namesi
Name:ruvAUniRule annotationImported
Ordered Locus Names:CLIBASIA_02200Imported
OrganismiLiberibacter asiaticus (strain psy62)Imported
Taxonomic identifieri537021 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeCandidatus Liberibacter
ProteomesiUP000002744: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. Holliday junction helicase complex Source: InterPro
Complete GO annotation...

Interactioni

Subunit structurei

Forms a complex with RuvB By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi537021.CLIBASIA_02200.

Family & Domainsi

Sequence similaritiesi

Belongs to the RuvA family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0632.
HOGENOMiHOG000057115.
KOiK03550.
OMAiMRIYHES.
OrthoDBiEOG679THG.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
HAMAPiMF_00031. DNA_helic_RuvA.
InterProiIPR011114. DNA_helicas_Holl-junc_RuvA_C.
IPR013849. DNA_helicase_Holl-junc_RuvA_I.
IPR012340. NA-bd_OB-fold.
IPR000085. RuvA.
IPR010994. RuvA_2-like.
[Graphical view]
PfamiPF07499. RuvA_C. 1 hit.
PF01330. RuvA_N. 1 hit.
[Graphical view]
SUPFAMiSSF46929. SSF46929. 1 hit.
SSF47781. SSF47781. 1 hit.
SSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

C6XF74-1 [UniParc]FASTAAdd to Basket

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MIGKIKGNIE GLYEDYVLID VQGVCYIIYC PIRTLSCLGK IGDFCTLFVE    50
THMRQDQIRL FGFLSDLDRQ WFMLLQSVQG VGARVAMGVL SRITATELVE 100
SIILQNSKVI AQIPGISMKI ASRIMTELKG KAISLSSVVQ QDMSCVNKEQ 150
AHICSMPSFA INAISALVNL GYGQDQATTA VVSVLKKEKN IADDSQIIRL 200
ALRAISC 207
Length:207
Mass (Da):22,737
Last modified:September 22, 2009 - v1
Checksum:i3567EF9BB9066D4E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001677 Genomic DNA. Translation: ACT57026.1.
RefSeqiYP_003064966.1. NC_012985.3.

Genome annotation databases

EnsemblBacteriaiACT57026; ACT57026; CLIBASIA_02200.
GeneIDi8209549.
KEGGilas:CLIBASIA_02200.
PATRICi31988452. VBICanLib64949_0693.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001677 Genomic DNA. Translation: ACT57026.1 .
RefSeqi YP_003064966.1. NC_012985.3.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 537021.CLIBASIA_02200.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACT57026 ; ACT57026 ; CLIBASIA_02200 .
GeneIDi 8209549.
KEGGi las:CLIBASIA_02200.
PATRICi 31988452. VBICanLib64949_0693.

Phylogenomic databases

eggNOGi COG0632.
HOGENOMi HOG000057115.
KOi K03550.
OMAi MRIYHES.
OrthoDBi EOG679THG.

Enzyme and pathway databases

BioCyci LASI537021:GHEM-680-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
HAMAPi MF_00031. DNA_helic_RuvA.
InterProi IPR011114. DNA_helicas_Holl-junc_RuvA_C.
IPR013849. DNA_helicase_Holl-junc_RuvA_I.
IPR012340. NA-bd_OB-fold.
IPR000085. RuvA.
IPR010994. RuvA_2-like.
[Graphical view ]
Pfami PF07499. RuvA_C. 1 hit.
PF01330. RuvA_N. 1 hit.
[Graphical view ]
SUPFAMi SSF46929. SSF46929. 1 hit.
SSF47781. SSF47781. 1 hit.
SSF50249. SSF50249. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of citrus huanglongbing bacterium, 'Candidatus Liberibacter asiaticus' obtained through metagenomics."
    Duan Y., Zhou L., Hall D.G., Li W., Doddapaneni H., Lin H., Liu L., Vahling C.M., Gabriel D.W., Williams K.P., Dickerman A., Sun Y., Gottwald T.
    Mol. Plant Microbe Interact. 22:1011-1020(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: psy62.

Entry informationi

Entry nameiC6XF74_LIBAP
AccessioniPrimary (citable) accession number: C6XF74
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: May 14, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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