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C6XF74 (C6XF74_LIBAP) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Holliday junction ATP-dependent DNA helicase RuvA HAMAP-Rule MF_00031

EC=3.6.4.12 HAMAP-Rule MF_00031
Gene names
Name:ruvA HAMAP-Rule MF_00031 EMBL ACT57026.1
Ordered Locus Names:CLIBASIA_02200 EMBL ACT57026.1
OrganismLiberibacter asiaticus (strain psy62) [Complete proteome] [HAMAP] EMBL ACT57026.1
Taxonomic identifier537021 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeCandidatus Liberibacter

Protein attributes

Sequence length207 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB By similarity. HAMAP-Rule MF_00031

Catalytic activity

ATP + H2O = ADP + phosphate. HAMAP-Rule MF_00031 SAAS SAAS011114

Subunit structure

Forms a complex with RuvB By similarity. HAMAP-Rule MF_00031

Sequence similarities

Belongs to the RuvA family. HAMAP-Rule MF_00031

Sequences

Sequence LengthMass (Da)Tools
C6XF74 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: 3567EF9BB9066D4E

FASTA20722,737
        10         20         30         40         50         60 
MIGKIKGNIE GLYEDYVLID VQGVCYIIYC PIRTLSCLGK IGDFCTLFVE THMRQDQIRL 

        70         80         90        100        110        120 
FGFLSDLDRQ WFMLLQSVQG VGARVAMGVL SRITATELVE SIILQNSKVI AQIPGISMKI 

       130        140        150        160        170        180 
ASRIMTELKG KAISLSSVVQ QDMSCVNKEQ AHICSMPSFA INAISALVNL GYGQDQATTA 

       190        200 
VVSVLKKEKN IADDSQIIRL ALRAISC 

« Hide

References

[1]"Complete genome sequence of citrus huanglongbing bacterium, 'Candidatus Liberibacter asiaticus' obtained through metagenomics."
Duan Y., Zhou L., Hall D.G., Li W., Doddapaneni H., Lin H., Liu L., Vahling C.M., Gabriel D.W., Williams K.P., Dickerman A., Sun Y., Gottwald T.
Mol. Plant Microbe Interact. 22:1011-1020(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: psy62.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001677 Genomic DNA. Translation: ACT57026.1.
RefSeqYP_003064966.1. NC_012985.3.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING537021.CLIBASIA_02200.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT57026; ACT57026; CLIBASIA_02200.
GeneID8209549.
KEGGlas:CLIBASIA_02200.
PATRIC31988452. VBICanLib64949_0693.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0632.
HOGENOMHOG000057115.
KOK03550.
OMADVVPEMI.
OrthoDBEOG679THG.

Enzyme and pathway databases

BioCycLASI537021:GHEM-680-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
HAMAPMF_00031. DNA_helic_RuvA.
InterProIPR011114. DNA_helicas_Holl-junc_RuvA_C.
IPR013849. DNA_helicase_Holl-junc_RuvA_I.
IPR012340. NA-bd_OB-fold.
IPR000085. RuvA.
IPR010994. RuvA_2-like.
[Graphical view]
PfamPF07499. RuvA_C. 1 hit.
PF01330. RuvA_N. 1 hit.
[Graphical view]
SUPFAMSSF46929. SSF46929. 1 hit.
SSF47781. SSF47781. 1 hit.
SSF50249. SSF50249. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6XF74_LIBAP
AccessionPrimary (citable) accession number: C6XF74
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: April 16, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)