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C6XF74

- C6XF74_LIBAP

UniProt

C6XF74 - C6XF74_LIBAP

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Protein

Holliday junction ATP-dependent DNA helicase RuvA

Gene

ruvA

Organism
Liberibacter asiaticus (strain psy62)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.UniRule annotation

Catalytic activityi

ATP + H2O = ADP + phosphate.UniRule annotationSAAS annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: UniProtKB-KW
  3. four-way junction helicase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: UniProtKB-KW
  2. DNA repair Source: UniProtKB-KW
  3. SOS response Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

HelicaseUniRule annotationSAAS annotation, Hydrolase

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotationSAAS annotation, DNA repair, SOS responseUniRule annotationSAAS annotation

Keywords - Ligandi

ATP-binding, DNA-bindingUniRule annotationSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciLASI537021:GHEM-680-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Holliday junction ATP-dependent DNA helicase RuvAUniRule annotation (EC:3.6.4.12UniRule annotation)
Gene namesi
Name:ruvAUniRule annotationImported
Ordered Locus Names:CLIBASIA_02200Imported
OrganismiLiberibacter asiaticus (strain psy62)Imported
Taxonomic identifieri537021 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeCandidatus Liberibacter
ProteomesiUP000002744: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. Holliday junction helicase complex Source: InterPro
Complete GO annotation...

Interactioni

Subunit structurei

Forms a complex with RuvB.UniRule annotation

Protein-protein interaction databases

STRINGi537021.CLIBASIA_02200.

Family & Domainsi

Sequence similaritiesi

Belongs to the RuvA family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0632.
HOGENOMiHOG000057115.
KOiK03550.
OMAiMRIYHES.
OrthoDBiEOG679THG.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
HAMAPiMF_00031. DNA_helic_RuvA.
InterProiIPR011114. DNA_helicas_Holl-junc_RuvA_C.
IPR013849. DNA_helicase_Holl-junc_RuvA_I.
IPR012340. NA-bd_OB-fold.
IPR000085. RuvA.
IPR010994. RuvA_2-like.
[Graphical view]
PfamiPF07499. RuvA_C. 1 hit.
PF01330. RuvA_N. 1 hit.
[Graphical view]
SUPFAMiSSF46929. SSF46929. 1 hit.
SSF47781. SSF47781. 1 hit.
SSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

C6XF74-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MIGKIKGNIE GLYEDYVLID VQGVCYIIYC PIRTLSCLGK IGDFCTLFVE
60 70 80 90 100
THMRQDQIRL FGFLSDLDRQ WFMLLQSVQG VGARVAMGVL SRITATELVE
110 120 130 140 150
SIILQNSKVI AQIPGISMKI ASRIMTELKG KAISLSSVVQ QDMSCVNKEQ
160 170 180 190 200
AHICSMPSFA INAISALVNL GYGQDQATTA VVSVLKKEKN IADDSQIIRL

ALRAISC
Length:207
Mass (Da):22,737
Last modified:September 22, 2009 - v1
Checksum:i3567EF9BB9066D4E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001677 Genomic DNA. Translation: ACT57026.1.
RefSeqiYP_003064966.1. NC_012985.3.

Genome annotation databases

EnsemblBacteriaiACT57026; ACT57026; CLIBASIA_02200.
GeneIDi8209549.
KEGGilas:CLIBASIA_02200.
PATRICi31988452. VBICanLib64949_0693.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001677 Genomic DNA. Translation: ACT57026.1 .
RefSeqi YP_003064966.1. NC_012985.3.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 537021.CLIBASIA_02200.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACT57026 ; ACT57026 ; CLIBASIA_02200 .
GeneIDi 8209549.
KEGGi las:CLIBASIA_02200.
PATRICi 31988452. VBICanLib64949_0693.

Phylogenomic databases

eggNOGi COG0632.
HOGENOMi HOG000057115.
KOi K03550.
OMAi MRIYHES.
OrthoDBi EOG679THG.

Enzyme and pathway databases

BioCyci LASI537021:GHEM-680-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
HAMAPi MF_00031. DNA_helic_RuvA.
InterProi IPR011114. DNA_helicas_Holl-junc_RuvA_C.
IPR013849. DNA_helicase_Holl-junc_RuvA_I.
IPR012340. NA-bd_OB-fold.
IPR000085. RuvA.
IPR010994. RuvA_2-like.
[Graphical view ]
Pfami PF07499. RuvA_C. 1 hit.
PF01330. RuvA_N. 1 hit.
[Graphical view ]
SUPFAMi SSF46929. SSF46929. 1 hit.
SSF47781. SSF47781. 1 hit.
SSF50249. SSF50249. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of citrus huanglongbing bacterium, 'Candidatus Liberibacter asiaticus' obtained through metagenomics."
    Duan Y., Zhou L., Hall D.G., Li W., Doddapaneni H., Lin H., Liu L., Vahling C.M., Gabriel D.W., Williams K.P., Dickerman A., Sun Y., Gottwald T.
    Mol. Plant Microbe Interact. 22:1011-1020(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Psy62Imported.
  2. "Diversity and plasticity of the intracellular plant pathogen and insect symbiont, 'Candidatus Liberibacter asiaticus', revealed by hyper variable prophage genes with intragenic tandem repeats."
    Zhou L., Powell C.A., Hoffman M.T., Li W., Fan G., Liu B., Lin H., Duan Y.
    Appl. Environ. Microbiol. 77:6663-6673(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: psy62Imported.

Entry informationi

Entry nameiC6XF74_LIBAP
AccessioniPrimary (citable) accession number: C6XF74
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: October 29, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3