Skip Header

Contribute Send feedback
Read comments (?) or add your own

C6XDK1 (C6XDK1_METSD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Thymidylate kinase HAMAP-Rule MF_00165
EC=2.7.4.9 HAMAP-Rule MF_00165
Alternative name(s):
dTMP kinase HAMAP-Rule MF_00165
Gene names
Name:tmk HAMAP-Rule MF_00165
Ordered Locus Names:Msip34_1381 EMBL ACT50626.1
OrganismMethylovorus sp. (strain SIP3-4) (Methylotenera sp. (strain SIP3-4)) [Complete proteome] [HAMAP] EMBL ACT50626.1
Taxonomic identifier582744 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Methylophilales › Methylophilaceae › Methylovorus ›

Protein attributes

Sequence length201 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis By similarity. HAMAP-Rule MF_00165

Catalytic activity

ATP + dTMP = ADP + dTDP. HAMAP-Rule MF_00165 SAAS SAAS018094

Sequence similarities

Belongs to the thymidylate kinase family. HAMAP-Rule MF_00165

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding10 – 178ATP By similarity HAMAP-Rule MF_00165

Sequences

Sequence LengthMass (Da)Tools
C6XDK1 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: B93EF4FFF2B26A62

FASTA20122,514
        10         20         30         40         50         60 
MRGKFITLEG MDGAGKSTHI PDILAQLQTR GVEVISTREP GGTALGEQLR EVLLHTPMAA 

        70         80         90        100        110        120 
ETESLLMFAA RQEHLSTLIL PALERGAYVL SDRFTDASFA YQHGGRGLAA ERIAQLEQWV 

       130        140        150        160        170        180 
QQGLQPDLTL LFDVPVEVSV QRLAAARTPD KFERESADFF RRIRRAYLDR AQQFPERFRI 

       190        200 
IDSNQPLEQV KLAVRAALST L

« Hide

References

[1]"Complete sequence of chromosome of Methylovorus sp. SIP3-4."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Kayluzhnaya M., Chistoserdova L.
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SIP3-4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001674 Genomic DNA. Translation: ACT50626.1.
RefSeqYP_003051153.1. NC_012969.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING582744.Msip34_1381.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT50626; ACT50626; Msip34_1381.
GeneID8173863.
KEGGmei:Msip34_1381.
PATRIC22617802. VBIMetSp110381_1390.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0125.
KOK00943.
OMARPPDATI.
ProtClustDBCLSK2529454.

Enzyme and pathway databases

BioCycMGLU582744:GHXQ-1509-MONOMER.

Family and domain databases

HAMAPMF_00165. Thymidylate_kinase.
InterProIPR018094. Thymidylate_kinase.
[Graphical view]
PANTHERPTHR10344. PTHR10344. 1 hit.
TIGRFAMsTIGR00041. DTMP_kinase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6XDK1_METSD
AccessionPrimary (citable) accession number: C6XDK1
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info