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Protein
Submitted name:

DNA polymerase III, epsilon subunit

Gene

Msip34_2797

Organism
Methylovorus glucosetrophus (strain SIP3-4)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

NucleotidyltransferaseImported, Transferase

Enzyme and pathway databases

BioCyciMGLU582744:GHXQ-2853-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase III, epsilon subunitImported (EC:2.7.7.7Imported)
Gene namesi
Ordered Locus Names:Msip34_2797Imported
OrganismiMethylovorus glucosetrophus (strain SIP3-4)Imported
Taxonomic identifieri582744 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaMethylophilalesMethylophilaceaeMethylovorus
ProteomesiUP000002743 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi582744.Msip34_2797.

Structurei

3D structure databases

ProteinModelPortaliC6XBR4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0322.
KOiK02342.
OMAiQFWQKIH.
OrthoDBiEOG6PKFH3.

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
3.40.1440.10. 1 hit.
InterProiIPR006054. DnaQ.
IPR006055. Exonuclease.
IPR013520. Exonuclease_RNaseT/DNA_pol3.
IPR027299. GIY-YIG_dom.
IPR000305. GIY-YIG_SF.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF01541. GIY-YIG. 1 hit.
PF00929. RNase_T. 1 hit.
[Graphical view]
SMARTiSM00479. EXOIII. 1 hit.
SM00465. GIYc. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
SSF82771. SSF82771. 1 hit.
TIGRFAMsiTIGR00573. dnaq. 1 hit.
PROSITEiPS50164. GIY_YIG. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6XBR4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLPAYVLLDL ETTGATPLVD RITEIALIRF ENGQEVSRWQ TLVNPETAIP
60 70 80 90 100
PFIQRLTGID DGMVATAPRF REVAGELLNH LEGAVLCAHN VRFDHGFLKN
110 120 130 140 150
EFKRIGIDLR QKVLCTVKLS RKLYPQHRSH SLDSIIERHS LQCGARHRAM
160 170 180 190 200
GDVVALVDFL RAAEAELGPV VIAQAARELL KGHTLPSGID ASILDDIPEG
210 220 230 240 250
PGVYLFYGDN QLPLYIGKSI NIRSRVLSHF SGDHASTKEM RISQEVKHIE
260 270 280 290 300
WIETAGEFSA LMLESRLVKE RQPIYNRRLR RERQLCSWRL AASHDARPLL
310 320 330 340 350
TLVREEEIDP PELGQLFGTF RSKRQAVEVL RQIAENHALC PKVLGLESGK
360 370 380 390 400
GPCFSHQLRK CKGVCAGKEA AELHYLRLQQ ALAAHRMKTW PYPGKIGIHE
410 420 430 440 450
RNPLTGQSQL HVFEHWCALG SVDDEASLHS LASSKTSLMF DLDTYKLLLR
460 470
ELAKASANIK CLVTGTTMVA
Length:470
Mass (Da):52,663
Last modified:September 22, 2009 - v1
Checksum:i39992B950CE3ED44
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001674 Genomic DNA. Translation: ACT52034.1.
RefSeqiWP_015831229.1. NC_012969.1.

Genome annotation databases

EnsemblBacteriaiACT52034; ACT52034; Msip34_2797.
KEGGimei:Msip34_2797.
PATRICi22620490. VBIMetSp110381_2715.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001674 Genomic DNA. Translation: ACT52034.1.
RefSeqiWP_015831229.1. NC_012969.1.

3D structure databases

ProteinModelPortaliC6XBR4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi582744.Msip34_2797.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACT52034; ACT52034; Msip34_2797.
KEGGimei:Msip34_2797.
PATRICi22620490. VBIMetSp110381_2715.

Phylogenomic databases

eggNOGiCOG0322.
KOiK02342.
OMAiQFWQKIH.
OrthoDBiEOG6PKFH3.

Enzyme and pathway databases

BioCyciMGLU582744:GHXQ-2853-MONOMER.

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
3.40.1440.10. 1 hit.
InterProiIPR006054. DnaQ.
IPR006055. Exonuclease.
IPR013520. Exonuclease_RNaseT/DNA_pol3.
IPR027299. GIY-YIG_dom.
IPR000305. GIY-YIG_SF.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF01541. GIY-YIG. 1 hit.
PF00929. RNase_T. 1 hit.
[Graphical view]
SMARTiSM00479. EXOIII. 1 hit.
SM00465. GIYc. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
SSF82771. SSF82771. 1 hit.
TIGRFAMsiTIGR00573. dnaq. 1 hit.
PROSITEiPS50164. GIY_YIG. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Methylovorus sp. SIP3-4."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Kayluzhnaya M., Chistoserdova L.
    Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SIP3-4Imported.

Entry informationi

Entry nameiC6XBR4_METGS
AccessioniPrimary (citable) accession number: C6XBR4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: July 22, 2015
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.