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C6XBR4

- C6XBR4_METGS

UniProt

C6XBR4 - C6XBR4_METGS

Protein
Submitted name:

DNA polymerase III, epsilon subunit

Gene

Msip34_2797

Organism
Methylovorus glucosetrophus (strain SIP3-4)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: InterPro
    2. DNA-directed DNA polymerase activity Source: UniProtKB-KW
    3. exonuclease activity Source: InterPro

    Keywords - Molecular functioni

    NucleotidyltransferaseImported, Transferase

    Enzyme and pathway databases

    BioCyciMGLU582744:GHXQ-2853-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase III, epsilon subunitImported (EC:2.7.7.7Imported)
    Gene namesi
    Ordered Locus Names:Msip34_2797Imported
    OrganismiMethylovorus glucosetrophus (strain SIP3-4)Imported
    Taxonomic identifieri582744 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaMethylophilalesMethylophilaceaeMethylovorus
    ProteomesiUP000002743: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi582744.Msip34_2797.

    Structurei

    3D structure databases

    ProteinModelPortaliC6XBR4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0322.
    KOiK02342.
    OMAiQFWQKIH.
    OrthoDBiEOG6PKFH3.

    Family and domain databases

    Gene3Di3.30.420.10. 1 hit.
    3.40.1440.10. 1 hit.
    InterProiIPR006054. DnaQ.
    IPR006055. Exonuclease.
    IPR013520. Exonuclease_RNaseT/DNA_pol3.
    IPR027299. GIY-YIG_dom.
    IPR000305. GIY-YIG_SF.
    IPR012337. RNaseH-like_dom.
    [Graphical view]
    PfamiPF01541. GIY-YIG. 1 hit.
    PF00929. RNase_T. 1 hit.
    [Graphical view]
    SMARTiSM00479. EXOIII. 1 hit.
    SM00465. GIYc. 1 hit.
    [Graphical view]
    SUPFAMiSSF53098. SSF53098. 1 hit.
    SSF82771. SSF82771. 1 hit.
    TIGRFAMsiTIGR00573. dnaq. 1 hit.
    PROSITEiPS50164. GIY_YIG. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C6XBR4-1 [UniParc]FASTAAdd to Basket

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    MLPAYVLLDL ETTGATPLVD RITEIALIRF ENGQEVSRWQ TLVNPETAIP    50
    PFIQRLTGID DGMVATAPRF REVAGELLNH LEGAVLCAHN VRFDHGFLKN 100
    EFKRIGIDLR QKVLCTVKLS RKLYPQHRSH SLDSIIERHS LQCGARHRAM 150
    GDVVALVDFL RAAEAELGPV VIAQAARELL KGHTLPSGID ASILDDIPEG 200
    PGVYLFYGDN QLPLYIGKSI NIRSRVLSHF SGDHASTKEM RISQEVKHIE 250
    WIETAGEFSA LMLESRLVKE RQPIYNRRLR RERQLCSWRL AASHDARPLL 300
    TLVREEEIDP PELGQLFGTF RSKRQAVEVL RQIAENHALC PKVLGLESGK 350
    GPCFSHQLRK CKGVCAGKEA AELHYLRLQQ ALAAHRMKTW PYPGKIGIHE 400
    RNPLTGQSQL HVFEHWCALG SVDDEASLHS LASSKTSLMF DLDTYKLLLR 450
    ELAKASANIK CLVTGTTMVA 470
    Length:470
    Mass (Da):52,663
    Last modified:September 22, 2009 - v1
    Checksum:i39992B950CE3ED44
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001674 Genomic DNA. Translation: ACT52034.1.
    RefSeqiWP_015831229.1. NC_012969.1.
    YP_003052561.1. NC_012969.1.

    Genome annotation databases

    EnsemblBacteriaiACT52034; ACT52034; Msip34_2797.
    GeneIDi8173650.
    KEGGimei:Msip34_2797.
    PATRICi22620490. VBIMetSp110381_2715.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001674 Genomic DNA. Translation: ACT52034.1 .
    RefSeqi WP_015831229.1. NC_012969.1.
    YP_003052561.1. NC_012969.1.

    3D structure databases

    ProteinModelPortali C6XBR4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 582744.Msip34_2797.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACT52034 ; ACT52034 ; Msip34_2797 .
    GeneIDi 8173650.
    KEGGi mei:Msip34_2797.
    PATRICi 22620490. VBIMetSp110381_2715.

    Phylogenomic databases

    eggNOGi COG0322.
    KOi K02342.
    OMAi QFWQKIH.
    OrthoDBi EOG6PKFH3.

    Enzyme and pathway databases

    BioCyci MGLU582744:GHXQ-2853-MONOMER.

    Family and domain databases

    Gene3Di 3.30.420.10. 1 hit.
    3.40.1440.10. 1 hit.
    InterProi IPR006054. DnaQ.
    IPR006055. Exonuclease.
    IPR013520. Exonuclease_RNaseT/DNA_pol3.
    IPR027299. GIY-YIG_dom.
    IPR000305. GIY-YIG_SF.
    IPR012337. RNaseH-like_dom.
    [Graphical view ]
    Pfami PF01541. GIY-YIG. 1 hit.
    PF00929. RNase_T. 1 hit.
    [Graphical view ]
    SMARTi SM00479. EXOIII. 1 hit.
    SM00465. GIYc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53098. SSF53098. 1 hit.
    SSF82771. SSF82771. 1 hit.
    TIGRFAMsi TIGR00573. dnaq. 1 hit.
    PROSITEi PS50164. GIY_YIG. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Methylovorus sp. SIP3-4."
      Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Kayluzhnaya M., Chistoserdova L.
      Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SIP3-4Imported.

    Entry informationi

    Entry nameiC6XBR4_METGS
    AccessioniPrimary (citable) accession number: C6XBR4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3