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C6XBR4

- C6XBR4_METGS

UniProt

C6XBR4 - C6XBR4_METGS

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Protein
Submitted name:

DNA polymerase III, epsilon subunit

Gene
Msip34_2797
Organism
Methylovorus glucosetrophus (strain SIP3-4)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. DNA-directed DNA polymerase activity Source: UniProtKB-KW
  3. exonuclease activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

NucleotidyltransferaseImported, Transferase

Enzyme and pathway databases

BioCyciMGLU582744:GHXQ-2853-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase III, epsilon subunitImported (EC:2.7.7.7Imported)
Gene namesi
Ordered Locus Names:Msip34_2797Imported
OrganismiMethylovorus glucosetrophus (strain SIP3-4)Imported
Taxonomic identifieri582744 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaMethylophilalesMethylophilaceaeMethylovorus
ProteomesiUP000002743: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi582744.Msip34_2797.

Structurei

3D structure databases

ProteinModelPortaliC6XBR4.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0322.
KOiK02342.
OMAiQFWQKIH.
OrthoDBiEOG6PKFH3.

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
3.40.1440.10. 1 hit.
InterProiIPR006054. DnaQ.
IPR006055. Exonuclease.
IPR013520. Exonuclease_RNaseT/DNA_pol3.
IPR027299. GIY-YIG_dom.
IPR000305. GIY-YIG_SF.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF01541. GIY-YIG. 1 hit.
PF00929. RNase_T. 1 hit.
[Graphical view]
SMARTiSM00479. EXOIII. 1 hit.
SM00465. GIYc. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
SSF82771. SSF82771. 1 hit.
TIGRFAMsiTIGR00573. dnaq. 1 hit.
PROSITEiPS50164. GIY_YIG. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6XBR4-1 [UniParc]FASTAAdd to Basket

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MLPAYVLLDL ETTGATPLVD RITEIALIRF ENGQEVSRWQ TLVNPETAIP    50
PFIQRLTGID DGMVATAPRF REVAGELLNH LEGAVLCAHN VRFDHGFLKN 100
EFKRIGIDLR QKVLCTVKLS RKLYPQHRSH SLDSIIERHS LQCGARHRAM 150
GDVVALVDFL RAAEAELGPV VIAQAARELL KGHTLPSGID ASILDDIPEG 200
PGVYLFYGDN QLPLYIGKSI NIRSRVLSHF SGDHASTKEM RISQEVKHIE 250
WIETAGEFSA LMLESRLVKE RQPIYNRRLR RERQLCSWRL AASHDARPLL 300
TLVREEEIDP PELGQLFGTF RSKRQAVEVL RQIAENHALC PKVLGLESGK 350
GPCFSHQLRK CKGVCAGKEA AELHYLRLQQ ALAAHRMKTW PYPGKIGIHE 400
RNPLTGQSQL HVFEHWCALG SVDDEASLHS LASSKTSLMF DLDTYKLLLR 450
ELAKASANIK CLVTGTTMVA 470
Length:470
Mass (Da):52,663
Last modified:September 22, 2009 - v1
Checksum:i39992B950CE3ED44
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001674 Genomic DNA. Translation: ACT52034.1.
RefSeqiWP_015831229.1. NC_012969.1.
YP_003052561.1. NC_012969.1.

Genome annotation databases

EnsemblBacteriaiACT52034; ACT52034; Msip34_2797.
GeneIDi8173650.
KEGGimei:Msip34_2797.
PATRICi22620490. VBIMetSp110381_2715.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001674 Genomic DNA. Translation: ACT52034.1 .
RefSeqi WP_015831229.1. NC_012969.1.
YP_003052561.1. NC_012969.1.

3D structure databases

ProteinModelPortali C6XBR4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 582744.Msip34_2797.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACT52034 ; ACT52034 ; Msip34_2797 .
GeneIDi 8173650.
KEGGi mei:Msip34_2797.
PATRICi 22620490. VBIMetSp110381_2715.

Phylogenomic databases

eggNOGi COG0322.
KOi K02342.
OMAi QFWQKIH.
OrthoDBi EOG6PKFH3.

Enzyme and pathway databases

BioCyci MGLU582744:GHXQ-2853-MONOMER.

Family and domain databases

Gene3Di 3.30.420.10. 1 hit.
3.40.1440.10. 1 hit.
InterProi IPR006054. DnaQ.
IPR006055. Exonuclease.
IPR013520. Exonuclease_RNaseT/DNA_pol3.
IPR027299. GIY-YIG_dom.
IPR000305. GIY-YIG_SF.
IPR012337. RNaseH-like_dom.
[Graphical view ]
Pfami PF01541. GIY-YIG. 1 hit.
PF00929. RNase_T. 1 hit.
[Graphical view ]
SMARTi SM00479. EXOIII. 1 hit.
SM00465. GIYc. 1 hit.
[Graphical view ]
SUPFAMi SSF53098. SSF53098. 1 hit.
SSF82771. SSF82771. 1 hit.
TIGRFAMsi TIGR00573. dnaq. 1 hit.
PROSITEi PS50164. GIY_YIG. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Methylovorus sp. SIP3-4."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Kayluzhnaya M., Chistoserdova L.
    Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SIP3-4.

Entry informationi

Entry nameiC6XBR4_METGS
AccessioniPrimary (citable) accession number: C6XBR4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: September 3, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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