Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

C6XBR4 - C6XBR4_METGS

UniProt

C6XBR4 - C6XBR4_METGS

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

DNA polymerase III, epsilon subunit

Gene

Msip34_2797

Organism
Methylovorus glucosetrophus (strain SIP3-4)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. DNA-directed DNA polymerase activity Source: UniProtKB-EC
  3. exonuclease activity Source: InterPro

GO - Biological processi

  1. DNA replication Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

NucleotidyltransferaseImported, Transferase

Enzyme and pathway databases

BioCyciMGLU582744:GHXQ-2853-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase III, epsilon subunitImported (EC:2.7.7.7Imported)
Gene namesi
Ordered Locus Names:Msip34_2797Imported
OrganismiMethylovorus glucosetrophus (strain SIP3-4)Imported
Taxonomic identifieri582744 [NCBI]
Taxonomic lineageiBacteria › Proteobacteria › Betaproteobacteria › Methylophilales › Methylophilaceae › Methylovorus ›
ProteomesiUP000002743: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi582744.Msip34_2797.

Structurei

3D structure databases

ProteinModelPortaliC6XBR4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0322.
KOiK02342.
OMAiQFWQKIH.
OrthoDBiEOG6PKFH3.

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
3.40.1440.10. 1 hit.
InterProiIPR006054. DnaQ.
IPR006055. Exonuclease.
IPR013520. Exonuclease_RNaseT/DNA_pol3.
IPR027299. GIY-YIG_dom.
IPR000305. GIY-YIG_SF.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF01541. GIY-YIG. 1 hit.
PF00929. RNase_T. 1 hit.
[Graphical view]
SMARTiSM00479. EXOIII. 1 hit.
SM00465. GIYc. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
SSF82771. SSF82771. 1 hit.
TIGRFAMsiTIGR00573. dnaq. 1 hit.
PROSITEiPS50164. GIY_YIG. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6XBR4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLPAYVLLDL ETTGATPLVD RITEIALIRF ENGQEVSRWQ TLVNPETAIP 
        60         70         80         90        100
PFIQRLTGID DGMVATAPRF REVAGELLNH LEGAVLCAHN VRFDHGFLKN 
       110        120        130        140        150
EFKRIGIDLR QKVLCTVKLS RKLYPQHRSH SLDSIIERHS LQCGARHRAM 
       160        170        180        190        200
GDVVALVDFL RAAEAELGPV VIAQAARELL KGHTLPSGID ASILDDIPEG 
       210        220        230        240        250
PGVYLFYGDN QLPLYIGKSI NIRSRVLSHF SGDHASTKEM RISQEVKHIE 
       260        270        280        290        300
WIETAGEFSA LMLESRLVKE RQPIYNRRLR RERQLCSWRL AASHDARPLL 
       310        320        330        340        350
TLVREEEIDP PELGQLFGTF RSKRQAVEVL RQIAENHALC PKVLGLESGK 
       360        370        380        390        400
GPCFSHQLRK CKGVCAGKEA AELHYLRLQQ ALAAHRMKTW PYPGKIGIHE 
       410        420        430        440        450
RNPLTGQSQL HVFEHWCALG SVDDEASLHS LASSKTSLMF DLDTYKLLLR 
       460        470
ELAKASANIK CLVTGTTMVA
Length:470
Mass (Da):52,663
Last modified:September 22, 2009 - v1
Checksum:i39992B950CE3ED44
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001674 Genomic DNA. Translation: ACT52034.1.
RefSeqiYP_003052561.1. NC_012969.1.

Genome annotation databases

EnsemblBacteriaiACT52034; ACT52034; Msip34_2797.
GeneIDi8173650.
KEGGimei:Msip34_2797.
PATRICi22620490. VBIMetSp110381_2715.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001674 Genomic DNA. Translation: ACT52034.1.
RefSeqiYP_003052561.1. NC_012969.1.

3D structure databases

ProteinModelPortaliC6XBR4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi582744.Msip34_2797.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACT52034; ACT52034; Msip34_2797.
GeneIDi8173650.
KEGGimei:Msip34_2797.
PATRICi22620490. VBIMetSp110381_2715.

Phylogenomic databases

eggNOGiCOG0322.
KOiK02342.
OMAiQFWQKIH.
OrthoDBiEOG6PKFH3.

Enzyme and pathway databases

BioCyciMGLU582744:GHXQ-2853-MONOMER.

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
3.40.1440.10. 1 hit.
InterProiIPR006054. DnaQ.
IPR006055. Exonuclease.
IPR013520. Exonuclease_RNaseT/DNA_pol3.
IPR027299. GIY-YIG_dom.
IPR000305. GIY-YIG_SF.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF01541. GIY-YIG. 1 hit.
PF00929. RNase_T. 1 hit.
[Graphical view]
SMARTiSM00479. EXOIII. 1 hit.
SM00465. GIYc. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
SSF82771. SSF82771. 1 hit.
TIGRFAMsiTIGR00573. dnaq. 1 hit.
PROSITEiPS50164. GIY_YIG. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Methylovorus sp. SIP3-4."
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Kayluzhnaya M., Chistoserdova L.
    Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SIP3-4Imported.

Entry informationi

Entry nameiC6XBR4_METGS
AccessioniPrimary (citable) accession number: C6XBR4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: January 7, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.