Msip34_2797

Functionⁱ

GO - Molecular functionⁱ

DNA binding Source: InterPro
DNA-directed DNA polymerase activity Source: UniProtKB-EC

Complete GO annotation...

GO - Biological processⁱ

DNA replication Source: InterPro

Complete GO annotation...

Keywordsⁱ

Molecular function	NucleotidyltransferaseImported, Transferase

Molecular function

NucleotidyltransferaseImported, Transferase

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: DNA polymerase III, epsilon subunitImported (EC:2.7.7.7Imported)
Gene namesⁱ	Ordered Locus Names:Msip34_2797Imported
Organismⁱ	Methylovorus glucosetrophus (strain SIP3-4)Imported
Taxonomic identifierⁱ	582744 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Methylophilales › Methylophilaceae › Methylovorus › Methylovorus glucosotrophus
Proteomesⁱ	UP000002743 Componentⁱ: Chromosome

Interactionⁱ

Protein-protein interaction databases

STRINGⁱ	582744.Msip34_2797.

STRINGⁱ

582744.Msip34_2797.

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	C6XBR4.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Domainⁱ	199 – 277	GIY-YIGInterPro annotationAdd BLAST		79

Phylogenomic databases

eggNOGⁱ	ENOG4108F0P. Bacteria. COG0322. LUCA. COG0847. LUCA.
KEGG Orthology (KO) More...KOⁱ	K02342.
OMAⁱ	VECAHAL.
Database of Orthologous Groups More...OrthoDBⁱ	POG091H01BK.

Family and domain databases

Gene3Dⁱ	3.30.420.10. 1 hit. 3.40.1440.10. 1 hit.
InterProⁱ	View protein in InterPro IPR006054. DnaQ. IPR013520. Exonuclease_RNaseT/DNA_pol3. IPR000305. GIY-YIG_SF. IPR012337. RNaseH-like_dom.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF01541. GIY-YIG. 1 hit. PF00929. RNase_T. 1 hit.
SMARTⁱ	View protein in SMART SM00479. EXOIII. 1 hit. SM00465. GIYc. 1 hit.
SUPFAMⁱ	SSF53098. SSF53098. 1 hit. SSF82771. SSF82771. 1 hit.
TIGRFAMsⁱ	TIGR00573. dnaq. 1 hit.
PROSITEⁱ	View protein in PROSITE PS50164. GIY_YIG. 1 hit.

Sequenceⁱ

Sequence statusⁱ: Complete.

C6XBR4-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MLPAYVLLDL ETTGATPLVD RITEIALIRF ENGQEVSRWQ TLVNPETAIP 
        60         70         80         90        100
PFIQRLTGID DGMVATAPRF REVAGELLNH LEGAVLCAHN VRFDHGFLKN 
       110        120        130        140        150
EFKRIGIDLR QKVLCTVKLS RKLYPQHRSH SLDSIIERHS LQCGARHRAM 
       160        170        180        190        200
GDVVALVDFL RAAEAELGPV VIAQAARELL KGHTLPSGID ASILDDIPEG 
       210        220        230        240        250
PGVYLFYGDN QLPLYIGKSI NIRSRVLSHF SGDHASTKEM RISQEVKHIE 
       260        270        280        290        300
WIETAGEFSA LMLESRLVKE RQPIYNRRLR RERQLCSWRL AASHDARPLL 
       310        320        330        340        350
TLVREEEIDP PELGQLFGTF RSKRQAVEVL RQIAENHALC PKVLGLESGK 
       360        370        380        390        400
GPCFSHQLRK CKGVCAGKEA AELHYLRLQQ ALAAHRMKTW PYPGKIGIHE 
       410        420        430        440        450
RNPLTGQSQL HVFEHWCALG SVDDEASLHS LASSKTSLMF DLDTYKLLLR 
       460        470
ELAKASANIK CLVTGTTMVA

Length:470

Mass (Da):52,663

Last modified:September 22, 2009 - v1

Checksum:ⁱ39992B950CE3ED44

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP001674 Genomic DNA. Translation: ACT52034.1.
NCBI Reference Sequences More...RefSeqⁱ	WP_015831229.1. NC_012969.1.

Genome annotation databases

EnsemblBacteriaⁱ	ACT52034; ACT52034; Msip34_2797.
KEGGⁱ	mei:Msip34_2797.

Similar proteinsⁱ

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:

100%	UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%	UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%	UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP001674 Genomic DNA. Translation: ACT52034.1.
NCBI Reference Sequences More...RefSeqⁱ	WP_015831229.1. NC_012969.1.

3D structure databases

ProteinModelPortalⁱ	C6XBR4.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

STRINGⁱ	582744.Msip34_2797.

STRINGⁱ

582744.Msip34_2797.

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

EnsemblBacteriaⁱ	ACT52034; ACT52034; Msip34_2797.
KEGGⁱ	mei:Msip34_2797.

Phylogenomic databases

eggNOGⁱ	ENOG4108F0P. Bacteria. COG0322. LUCA. COG0847. LUCA.
KEGG Orthology (KO) More...KOⁱ	K02342.
OMAⁱ	VECAHAL.
Database of Orthologous Groups More...OrthoDBⁱ	POG091H01BK.

Family and domain databases

Gene3Dⁱ	3.30.420.10. 1 hit. 3.40.1440.10. 1 hit.
InterProⁱ	View protein in InterPro IPR006054. DnaQ. IPR013520. Exonuclease_RNaseT/DNA_pol3. IPR000305. GIY-YIG_SF. IPR012337. RNaseH-like_dom.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF01541. GIY-YIG. 1 hit. PF00929. RNase_T. 1 hit.
SMARTⁱ	View protein in SMART SM00479. EXOIII. 1 hit. SM00465. GIYc. 1 hit.
SUPFAMⁱ	SSF53098. SSF53098. 1 hit. SSF82771. SSF82771. 1 hit.
TIGRFAMsⁱ	TIGR00573. dnaq. 1 hit.
PROSITEⁱ	View protein in PROSITE PS50164. GIY_YIG. 1 hit.
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	C6XBR4_METGS
Accessionⁱ	C6XBR4Primary (citable) accession number: C6XBR4
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	September 22, 2009
	Last sequence update:	September 22, 2009
	Last modified:	June 7, 2017
	This is version 53 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteomeImported

UniProtKB - C6XBR4 (C6XBR4_METGS)

Your basket is currently empty.

DNA polymerase III, epsilon subunit

Select a section on the left to see content.

Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Keywordsⁱ

Names & Taxonomyⁱ

Interactionⁱ

Protein-protein interaction databases

Structureⁱ

3D structure databases

Family & Domainsⁱ

Domains and Repeats

Phylogenomic databases

Family and domain databases

Sequenceⁱ

Sequence databases

Genome annotation databases

Similar proteinsⁱ

Cross-referencesⁱ

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - C6XBR4 (C6XBR4_METGS)

Your basket is currently empty.

DNA polymerase III, epsilon subunit

Msip34_2797

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Phylogenomic databases

Family and domain databases

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including length and molecular weight.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Interactionⁱ

Structureⁱ

Family & Domainsⁱ

Sequenceⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ