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C6X447

- C6X447_FLAB3

UniProt

C6X447 - C6X447_FLAB3

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Protein
Submitted name: Periplasmic alpha-amylase
Gene
FIC_00730
Organism
Flavobacteriaceae bacterium (strain 3519-10)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciFBAC531844:GHFZ-730-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Periplasmic alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Ordered Locus Names:FIC_00730Imported
OrganismiFlavobacteriaceae bacterium (strain 3519-10)Imported
Taxonomic identifieri531844 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceae
ProteomesiUP000001512: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi531844.FIC_00730.

Structurei

3D structure databases

ProteinModelPortaliC6X447.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000273912.
KOiK01176.
OMAiALINFDM.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

C6X447-1 [UniParc]FASTAAdd to Basket

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MKKIFLLAGF AMLTSCATLQ NNSKPNFTWE GANMYFLLTD RFANGDKNND    50
VNFGRTEKAA VLRGFEGGDL RGIIQKIDEN YFTDLGINAI WMTPVVEQIH 100
GATDEGTGDT YGFHGYWAKD WTALDPNFGT KADLKELVEK AHAKGIRIVL 150
DAVVNHTGPV TATDPVYPAS WVRTSPQCQY NNYQNTTACT LVANLPDVIT 200
ESDAAAELPQ MLVDKWRSEG RYETEMKSLD EFFARTGYPK APKYYIMKWL 250
ADYVQEFGID GYRVDTVKHT NEDVWKDFQL ICQEAFDIYK TENPAKVLDN 300
NLFFMVGEVY GYGISQKQDY NFGDKKVNYY QNGFKSLINF DFKGDANKTY 350
DELFSDYSKL LHSDLNGKTV MNYLTSHDDG SPFDKDRKRT YESATKLLLA 400
PGISQVYYGD ETARDLTIEG TTGDATLRSN MNWSDVKYNP GTKKLLEHYQ 450
KLGKFRANHP AVGAGVHQVV SAAPYWFTRT YQNDVVLVGL DLNSGLKTVS 500
VTGIFEGGTK VRDAYSGKTS KVENGRISFD TEFSIVLVEK I 541
Length:541
Mass (Da):60,963
Last modified:September 22, 2009 - v1
Checksum:i7A7CDF7320FF2221
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001673 Genomic DNA. Translation: ACU07185.1.
RefSeqiWP_012782331.1. NC_013062.1.
YP_003095247.1. NC_013062.1.

Genome annotation databases

EnsemblBacteriaiACU07185; ACU07185; FIC_00730.
GeneIDi8256154.
KEGGifba:FIC_00730.
PATRICi21890480. VBIFlaBac12467_0724.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001673 Genomic DNA. Translation: ACU07185.1 .
RefSeqi WP_012782331.1. NC_013062.1.
YP_003095247.1. NC_013062.1.

3D structure databases

ProteinModelPortali C6X447.
ModBasei Search...

Protein-protein interaction databases

STRINGi 531844.FIC_00730.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACU07185 ; ACU07185 ; FIC_00730 .
GeneIDi 8256154.
KEGGi fba:FIC_00730.
PATRICi 21890480. VBIFlaBac12467_0724.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000273912.
KOi K01176.
OMAi ALINFDM.
OrthoDBi EOG65QWH3.

Enzyme and pathway databases

BioCyci FBAC531844:GHFZ-730-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProi IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "A bacterial ice-binding protein from the Vostok ice core."
    Raymond J.A., Christner B.C., Schuster S.C.
    Extremophiles 12:713-717(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 3519-10Imported.

Entry informationi

Entry nameiC6X447_FLAB3
AccessioniPrimary (citable) accession number: C6X447
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: September 3, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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