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C6X447

- C6X447_FLAB3

UniProt

C6X447 - C6X447_FLAB3

Protein
Submitted name:

Periplasmic alpha-amylase

Gene

FIC_00730

Organism
Flavobacteriaceae bacterium (strain 3519-10)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseImported, Hydrolase

    Enzyme and pathway databases

    BioCyciFBAC531844:GHFZ-730-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Periplasmic alpha-amylaseImported (EC:3.2.1.1Imported)
    Gene namesi
    Ordered Locus Names:FIC_00730Imported
    OrganismiFlavobacteriaceae bacterium (strain 3519-10)Imported
    Taxonomic identifieri531844 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceae
    ProteomesiUP000001512: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi531844.FIC_00730.

    Structurei

    3D structure databases

    ProteinModelPortaliC6X447.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000273912.
    KOiK01176.
    OMAiALINFDM.
    OrthoDBiEOG65QWH3.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 2 hits.
    InterProiIPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    C6X447-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKKIFLLAGF AMLTSCATLQ NNSKPNFTWE GANMYFLLTD RFANGDKNND    50
    VNFGRTEKAA VLRGFEGGDL RGIIQKIDEN YFTDLGINAI WMTPVVEQIH 100
    GATDEGTGDT YGFHGYWAKD WTALDPNFGT KADLKELVEK AHAKGIRIVL 150
    DAVVNHTGPV TATDPVYPAS WVRTSPQCQY NNYQNTTACT LVANLPDVIT 200
    ESDAAAELPQ MLVDKWRSEG RYETEMKSLD EFFARTGYPK APKYYIMKWL 250
    ADYVQEFGID GYRVDTVKHT NEDVWKDFQL ICQEAFDIYK TENPAKVLDN 300
    NLFFMVGEVY GYGISQKQDY NFGDKKVNYY QNGFKSLINF DFKGDANKTY 350
    DELFSDYSKL LHSDLNGKTV MNYLTSHDDG SPFDKDRKRT YESATKLLLA 400
    PGISQVYYGD ETARDLTIEG TTGDATLRSN MNWSDVKYNP GTKKLLEHYQ 450
    KLGKFRANHP AVGAGVHQVV SAAPYWFTRT YQNDVVLVGL DLNSGLKTVS 500
    VTGIFEGGTK VRDAYSGKTS KVENGRISFD TEFSIVLVEK I 541
    Length:541
    Mass (Da):60,963
    Last modified:September 22, 2009 - v1
    Checksum:i7A7CDF7320FF2221
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001673 Genomic DNA. Translation: ACU07185.1.
    RefSeqiWP_012782331.1. NC_013062.1.
    YP_003095247.1. NC_013062.1.

    Genome annotation databases

    EnsemblBacteriaiACU07185; ACU07185; FIC_00730.
    GeneIDi8256154.
    KEGGifba:FIC_00730.
    PATRICi21890480. VBIFlaBac12467_0724.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001673 Genomic DNA. Translation: ACU07185.1 .
    RefSeqi WP_012782331.1. NC_013062.1.
    YP_003095247.1. NC_013062.1.

    3D structure databases

    ProteinModelPortali C6X447.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 531844.FIC_00730.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACU07185 ; ACU07185 ; FIC_00730 .
    GeneIDi 8256154.
    KEGGi fba:FIC_00730.
    PATRICi 21890480. VBIFlaBac12467_0724.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000273912.
    KOi K01176.
    OMAi ALINFDM.
    OrthoDBi EOG65QWH3.

    Enzyme and pathway databases

    BioCyci FBAC531844:GHFZ-730-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 2 hits.
    InterProi IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "A bacterial ice-binding protein from the Vostok ice core."
      Raymond J.A., Christner B.C., Schuster S.C.
      Extremophiles 12:713-717(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 3519-10Imported.

    Entry informationi

    Entry nameiC6X447_FLAB3
    AccessioniPrimary (citable) accession number: C6X447
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3