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C6X2H4 (C6X2H4_FLAB3) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length489 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL ACU08637.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

calcium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C6X2H4 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: 34169898DAE87FFB

FASTA48956,205
        10         20         30         40         50         60 
MNPTMIQFFH WYSDGDAQLY EQVKNSADYL RELGISSVWL PPAYKSAGGG FSVGYDPYDL 

        70         80         90        100        110        120 
YDLGEFDQKG TVSTKYGNRQ QLVEACRSLQ QNGISVIADI VLNHKAGGDE KEIFHAVKVD 

       130        140        150        160        170        180 
PENRQQNISE PFEIESYTKF TFPGRGDQYS EFKWNFQCFS GVDYAEGHDG IFQIIHDHGD 

       190        200        210        220        230        240 
GWEEMIDDEK GNYDFLMYND IEHRNPFVRE ELHTWGKWYH DQIFFDGVRL DAVKHQTPEF 

       250        260        270        280        290        300 
YKGWLYTLRA DTGKNIFAVG EYWAPGELHL LQKYIDATEG SMSLFDSSLQ HNFHQASNQG 

       310        320        330        340        350        360 
ADYDLRQIFD ETLTLANPLL SVTVVDNHDT QPLQALEAPV EYWFKPLAYA LILLRENGYP 

       370        380        390        400        410        420 
CVFYPDLFGA HYTDKDAEGN DREIFLNKVE KIEELLKARQ LFAYGPQRDY WEDANCLGWV 

       430        440        450        460        470        480 
REGDGEHPGC AVVLSNKDAY TKPMEMGLTY AGQNFYDYLG WFPEQVTIEE NGWGNFPVPA 


GNVSVWVPA 

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References

[1]"A bacterial ice-binding protein from the Vostok ice core."
Raymond J.A., Christner B.C., Schuster S.C.
Extremophiles 12:713-717(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 3519-10 EMBL ACU08637.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001673 Genomic DNA. Translation: ACU08637.1.
RefSeqYP_003096699.1. NC_013062.1.

3D structure databases

ProteinModelPortalC6X2H4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING531844.FIC_02202.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACU08637; ACU08637; FIC_02202.
GeneID8257626.
KEGGfba:FIC_02202.
PATRIC21893442. VBIFlaBac12467_2185.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000094847.
KOK01176.
OMARATKYGD.
OrthoDBEOG65QWH3.

Enzyme and pathway databases

BioCycFBAC531844:GHFZ-2202-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6X2H4_FLAB3
AccessionPrimary (citable) accession number: C6X2H4
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: May 14, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)