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C6X2H4

- C6X2H4_FLAB3

UniProt

C6X2H4 - C6X2H4_FLAB3

Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

FIC_02202

Organism
Flavobacteriaceae bacterium (strain 3519-10)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseImported, Hydrolase

    Enzyme and pathway databases

    BioCyciFBAC531844:GHFZ-2202-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Cytoplasmic alpha-amylaseImported (EC:3.2.1.1Imported)
    Gene namesi
    Ordered Locus Names:FIC_02202Imported
    OrganismiFlavobacteriaceae bacterium (strain 3519-10)Imported
    Taxonomic identifieri531844 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceae
    ProteomesiUP000001512: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi531844.FIC_02202.

    Structurei

    3D structure databases

    ProteinModelPortaliC6X2H4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000094847.
    KOiK01176.
    OMAiRATKYGD.
    OrthoDBiEOG65QWH3.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR013776. A-amylase_thermo.
    IPR015237. Alpha-amylase_C_pro.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF09154. DUF1939. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C6X2H4-1 [UniParc]FASTAAdd to Basket

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    MNPTMIQFFH WYSDGDAQLY EQVKNSADYL RELGISSVWL PPAYKSAGGG    50
    FSVGYDPYDL YDLGEFDQKG TVSTKYGNRQ QLVEACRSLQ QNGISVIADI 100
    VLNHKAGGDE KEIFHAVKVD PENRQQNISE PFEIESYTKF TFPGRGDQYS 150
    EFKWNFQCFS GVDYAEGHDG IFQIIHDHGD GWEEMIDDEK GNYDFLMYND 200
    IEHRNPFVRE ELHTWGKWYH DQIFFDGVRL DAVKHQTPEF YKGWLYTLRA 250
    DTGKNIFAVG EYWAPGELHL LQKYIDATEG SMSLFDSSLQ HNFHQASNQG 300
    ADYDLRQIFD ETLTLANPLL SVTVVDNHDT QPLQALEAPV EYWFKPLAYA 350
    LILLRENGYP CVFYPDLFGA HYTDKDAEGN DREIFLNKVE KIEELLKARQ 400
    LFAYGPQRDY WEDANCLGWV REGDGEHPGC AVVLSNKDAY TKPMEMGLTY 450
    AGQNFYDYLG WFPEQVTIEE NGWGNFPVPA GNVSVWVPA 489
    Length:489
    Mass (Da):56,205
    Last modified:September 22, 2009 - v1
    Checksum:i34169898DAE87FFB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001673 Genomic DNA. Translation: ACU08637.1.
    RefSeqiWP_015806921.1. NC_013062.1.
    YP_003096699.1. NC_013062.1.

    Genome annotation databases

    EnsemblBacteriaiACU08637; ACU08637; FIC_02202.
    GeneIDi8257626.
    KEGGifba:FIC_02202.
    PATRICi21893442. VBIFlaBac12467_2185.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001673 Genomic DNA. Translation: ACU08637.1 .
    RefSeqi WP_015806921.1. NC_013062.1.
    YP_003096699.1. NC_013062.1.

    3D structure databases

    ProteinModelPortali C6X2H4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 531844.FIC_02202.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACU08637 ; ACU08637 ; FIC_02202 .
    GeneIDi 8257626.
    KEGGi fba:FIC_02202.
    PATRICi 21893442. VBIFlaBac12467_2185.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000094847.
    KOi K01176.
    OMAi RATKYGD.
    OrthoDBi EOG65QWH3.

    Enzyme and pathway databases

    BioCyci FBAC531844:GHFZ-2202-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR013776. A-amylase_thermo.
    IPR015237. Alpha-amylase_C_pro.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF09154. DUF1939. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "A bacterial ice-binding protein from the Vostok ice core."
      Raymond J.A., Christner B.C., Schuster S.C.
      Extremophiles 12:713-717(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 3519-10Imported.

    Entry informationi

    Entry nameiC6X2H4_FLAB3
    AccessioniPrimary (citable) accession number: C6X2H4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3