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C6X2H4

- C6X2H4_FLAB3

UniProt

C6X2H4 - C6X2H4_FLAB3

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Protein
Submitted name: Cytoplasmic alpha-amylase
Gene
FIC_02202
Organism
Flavobacteriaceae bacterium (strain 3519-10)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciFBAC531844:GHFZ-2202-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Ordered Locus Names:FIC_02202Imported
OrganismiFlavobacteriaceae bacterium (strain 3519-10)Imported
Taxonomic identifieri531844 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceae
ProteomesiUP000001512: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi531844.FIC_02202.

Structurei

3D structure databases

ProteinModelPortaliC6X2H4.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000094847.
KOiK01176.
OMAiRATKYGD.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

C6X2H4-1 [UniParc]FASTAAdd to Basket

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MNPTMIQFFH WYSDGDAQLY EQVKNSADYL RELGISSVWL PPAYKSAGGG    50
FSVGYDPYDL YDLGEFDQKG TVSTKYGNRQ QLVEACRSLQ QNGISVIADI 100
VLNHKAGGDE KEIFHAVKVD PENRQQNISE PFEIESYTKF TFPGRGDQYS 150
EFKWNFQCFS GVDYAEGHDG IFQIIHDHGD GWEEMIDDEK GNYDFLMYND 200
IEHRNPFVRE ELHTWGKWYH DQIFFDGVRL DAVKHQTPEF YKGWLYTLRA 250
DTGKNIFAVG EYWAPGELHL LQKYIDATEG SMSLFDSSLQ HNFHQASNQG 300
ADYDLRQIFD ETLTLANPLL SVTVVDNHDT QPLQALEAPV EYWFKPLAYA 350
LILLRENGYP CVFYPDLFGA HYTDKDAEGN DREIFLNKVE KIEELLKARQ 400
LFAYGPQRDY WEDANCLGWV REGDGEHPGC AVVLSNKDAY TKPMEMGLTY 450
AGQNFYDYLG WFPEQVTIEE NGWGNFPVPA GNVSVWVPA 489
Length:489
Mass (Da):56,205
Last modified:September 22, 2009 - v1
Checksum:i34169898DAE87FFB
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001673 Genomic DNA. Translation: ACU08637.1.
RefSeqiWP_015806921.1. NC_013062.1.
YP_003096699.1. NC_013062.1.

Genome annotation databases

EnsemblBacteriaiACU08637; ACU08637; FIC_02202.
GeneIDi8257626.
KEGGifba:FIC_02202.
PATRICi21893442. VBIFlaBac12467_2185.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001673 Genomic DNA. Translation: ACU08637.1 .
RefSeqi WP_015806921.1. NC_013062.1.
YP_003096699.1. NC_013062.1.

3D structure databases

ProteinModelPortali C6X2H4.
ModBasei Search...

Protein-protein interaction databases

STRINGi 531844.FIC_02202.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACU08637 ; ACU08637 ; FIC_02202 .
GeneIDi 8257626.
KEGGi fba:FIC_02202.
PATRICi 21893442. VBIFlaBac12467_2185.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000094847.
KOi K01176.
OMAi RATKYGD.
OrthoDBi EOG65QWH3.

Enzyme and pathway databases

BioCyci FBAC531844:GHFZ-2202-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view ]
PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "A bacterial ice-binding protein from the Vostok ice core."
    Raymond J.A., Christner B.C., Schuster S.C.
    Extremophiles 12:713-717(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 3519-10Imported.

Entry informationi

Entry nameiC6X2H4_FLAB3
AccessioniPrimary (citable) accession number: C6X2H4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: September 3, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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