C6X1X8 (C6X1X8_FLAB3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L36 HAMAP-Rule MF_00251 RuleBase RU000571

Gene names

Name:	rpmJ HAMAP-Rule MF_00251
Ordered Locus Names:	FIC_01999

Organism

Flavobacteriaceae bacterium (strain 3519-10) [Complete proteome] [HAMAP]

Taxonomic identifier

531844 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › unclassified Flavobacteriaceae

Protein attributes

Sequence length	38 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L36P family. HAMAP-Rule MF_00251 RuleBase RU000571

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP-Rule MF_00251 RuleBase RU000571 EMBL ACU08441.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6X1X8 [UniParc]. Last modified September 22, 2009. Version 1. Checksum: 2316C9CB8336D47A	FASTA	38	4,457
	10 20 30 MKVRASIKKR SADCKIVRRK GVLFVINKKN PKFKQRQG

References

[1]	"A bacterial ice-binding protein from the Vostok ice core." Raymond J.A., Christner B.C., Schuster S.C. Extremophiles 12:713-717(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 3519-10.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001673 Genomic DNA. Translation: ACU08441.1.
RefSeq	YP_003096503.1. NC_013062.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	531844.FIC_01999.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACU08441; ACU08441; FIC_01999.
GeneID	8257423.
KEGG	fba:FIC_01999.
PATRIC	21893028. VBIFlaBac12467_1985.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG129164.
HOGENOM	HOG000111585.
KO	K02919.
Enzyme and pathway databases
BioCyc	FBAC531844:GHFZ-1999-MONOMER.
Family and domain databases
HAMAP	MF_00251. Ribosomal_L36.
InterPro	IPR000473. Ribosomal_L36. [Graphical view]
PANTHER	PTHR18804. PTHR18804. 1 hit.
Pfam	PF00444. Ribosomal_L36. 1 hit. [Graphical view]
SUPFAM	SSF57840. Ribosomal_L36. 1 hit.
TIGRFAMs	TIGR01022. rpmJ_bact. 1 hit.
PROSITE	PS00828. RIBOSOMAL_L36. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C6X1X8_FLAB3

Accession

Primary (citable) accession number: C6X1X8

Entry history

Integrated into UniProtKB/TrEMBL:	September 22, 2009
Last sequence update:	September 22, 2009
Last modified:	May 29, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)