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C6X1D5 (C6X1D5_FLAB3) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length526 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C6X1D5 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: 43528CEF2BDD3336

FASTA52660,699
        10         20         30         40         50         60 
MKHFAELISS LESSNKTTAK VDAMVHYLRT APENDKLWFL ALFTGKRPKR PVNTNLLRQW 

        70         80         90        100        110        120 
ALEIIQLPEW LFLESYSSVG DLGETISLIL PPPQNDISKS LSQWMDELGD LAHKTEAEKK 

       130        140        150        160        170        180 
AYVTESWNGL DYTERFIFNK LIGGSFRIGV SKKLLISALS KYSEIDSSQL MHSIMGKWDI 

       190        200        210        220        230        240 
NEINFEDLIA GININPDNSK PYPFCLAYPL EKETDELGDP AEWQAEYKWD GIRGQLIRRN 

       250        260        270        280        290        300 
DEVFIWSRGE ELVTPQFPEI VSALEKMTGN FVIDGEILAV TEKGVLNFNE LQKRLNRKTI 

       310        320        330        340        350        360 
SAKMLKEIPV KVFAYDILER DDEDLRGKPL TYRRKILEEL IHSQAPENIT LSDIVPFQKW 

       370        380        390        400        410        420 
EDLVEVRDNS RLNNSEGLML KHKESLYHSG RKKGDWWKWK VDPLTIDAVL IYAQKGSGRR 

       430        440        450        460        470        480 
SGYYTDYTFA VKKEDQLVTV AKAYSGLTDK EIMEVSRFVT KNSLEKFGPV RTVKPELVFE 

       490        500        510        520 
IAFEGIGLSN RHKSGVALRF PRILRWRRDK KADEIDDIEE VKKLIR 

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References

[1]"A bacterial ice-binding protein from the Vostok ice core."
Raymond J.A., Christner B.C., Schuster S.C.
Extremophiles 12:713-717(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 3519-10 EMBL ACU08248.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001673 Genomic DNA. Translation: ACU08248.1.
RefSeqYP_003096310.1. NC_013062.1.

3D structure databases

ProteinModelPortalC6X1D5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING531844.FIC_01805.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACU08248; ACU08248; FIC_01805.
GeneID8257229.
KEGGfba:FIC_01805.
PATRIC21892644. VBIFlaBac12467_1794.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMANRHKSGV.
OrthoDBEOG6Q8HXT.

Enzyme and pathway databases

BioCycFBAC531844:GHFZ-1805-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6X1D5_FLAB3
AccessionPrimary (citable) accession number: C6X1D5
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: May 14, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)