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C6X0M0 (C6X0M0_FLAB3) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.13.11.27 EMBL ACU06906.1
Gene names
Ordered Locus Names:FIC_00444 EMBL ACU06906.1
OrganismFlavobacteriaceae bacterium (strain 3519-10) [Complete proteome] [HAMAP] EMBL ACU06906.1
Taxonomic identifier531844 [NCBI]
Taxonomic lineageBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceae

Protein attributes

Sequence length313 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 iron ion per subunit By similarity. PIRSR PIRSR009283-1

Sequence similarities

Belongs to the 4HPPD family. PIRSR PIRSR009283-1

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding1181Iron By similarity PIRSR PIRSR009283-1
Metal binding2011Iron By similarity PIRSR PIRSR009283-1
Metal binding2811Iron By similarity PIRSR PIRSR009283-1

Sequences

Sequence LengthMass (Da)Tools
C6X0M0 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: 2F80B00576816957

FASTA31335,741
        10         20         30         40         50         60 
MVQQGKIRLV FTSGLNSNSP ICEHQKKHGD GVKVLALWVD DAYSAFEETT KRGAKPYLEP 

        70         80         90        100        110        120 
LTLTDEQGEV RMSGIYTYGE TVHMFVERKN YHGDFMPGYQ KWVSNYNPTE VGLLYVDHCV 

       130        140        150        160        170        180 
GNVDWNRMIP TVEWYENVMG FVNILSFDDK QINTEYSALM SKVMSNGNGF AKFPINEPAE 

       190        200        210        220        230        240 
GKRKSQVEEY LDFYEDEGVQ HIAVATKDII RTVTELKARG IEFLPAPPNS YYDMVPERVG 

       250        260        270        280        290        300 
TIDEDIKKLS DLGILIDCDE EGYLLQIFTK PVEDRPTLFF EIIERHGAQS FGAGNFKALF 

       310 
EALEKEQERR GNL 

« Hide

References

[1]"A bacterial ice-binding protein from the Vostok ice core."
Raymond J.A., Christner B.C., Schuster S.C.
Extremophiles 12:713-717(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 3519-10 EMBL ACU06906.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001673 Genomic DNA. Translation: ACU06906.1.
RefSeqYP_003094968.1. NC_013062.1.

3D structure databases

ProteinModelPortalC6X0M0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING531844.FIC_00444.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACU06906; ACU06906; FIC_00444.
GeneID8255868.
KEGGfba:FIC_00444.
PATRIC21889880. VBIFlaBac12467_0431.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3185.
HOGENOMHOG000188687.
KOK00457.
OMANGSGIQH.
OrthoDBEOG68SVVG.
ProtClustDBCLSK902447.

Enzyme and pathway databases

BioCycFBAC531844:GHFZ-444-MONOMER.

Family and domain databases

InterProIPR005956. 4OHPhenylPyrv_dOase.
IPR004360. Glyas_Fos-R_dOase_dom.
[Graphical view]
PANTHERPTHR11959. PTHR11959. 1 hit.
PfamPF00903. Glyoxalase. 1 hit.
[Graphical view]
PIRSFPIRSF009283. HPP_dOase. 1 hit.
TIGRFAMsTIGR01263. 4HPPD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6X0M0_FLAB3
AccessionPrimary (citable) accession number: C6X0M0
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: November 13, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)