C6WTF1 (C6WTF1_METML) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L30 HAMAP-Rule MF_01371

Gene names

Name:	rpmD HAMAP-Rule MF_01371
Ordered Locus Names:	Mmol_0363

Organism

Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) [Complete proteome] [HAMAP]

Taxonomic identifier

583345 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Methylophilales › Methylophilaceae › Methylotenera › Methylotenera mobilis

Protein attributes

Sequence length	65 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subunit structure	Part of the 50S ribosomal subunit By similarity. SAAS SAAS005996 HAMAP-Rule MF_01371
Sequence similarities	Belongs to the ribosomal protein L30P family. HAMAP-Rule MF_01371

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein SAAS SAAS005996 HAMAP-Rule MF_01371 EMBL ACT47273.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6WTF1 [UniParc]. Last modified September 22, 2009. Version 1. Checksum: D60C551D96EB1380	FASTA	65	7,124
	10 20 30 40 50 60 MAKAKKDAST IKVTLVRSVI GRIEAHKATV KGLGLRRMHH TVELQDTPAI RGMINTVGYL LKVEA

References

[1]

"Complete sequence of Methylotenera mobilis JLW8." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K.M., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Kayluzhnaya M., Chistoserdova L. Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JLW8 / ATCC BAA-1282 / DSM 17540.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001672 Genomic DNA. Translation: ACT47273.1.
RefSeq	YP_003047800.1. NC_012968.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	583345.Mmol_0363.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACT47273; ACT47273; Mmol_0363.
GeneID	8171466.
KEGG	mmb:Mmol_0363.
PATRIC	22610885. VBIMetMob89187_0368.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1841.
HOGENOM	HOG000039916.
KO	K02907.
OMA	LEDTACV.
ProtClustDB	CLSK2529154.
Enzyme and pathway databases
BioCyc	MMOB583345:GHCF-378-MONOMER.
Family and domain databases
Gene3D	3.30.1390.20. 1 hit.
HAMAP	MF_01371_B. Ribosomal_L30_B.
InterPro	IPR005996. Ribosomal_L30_bac-type. IPR016082. Ribosomal_L30_ferredoxin-like. [Graphical view]
Pfam	PF00327. Ribosomal_L30. 1 hit. [Graphical view]
PIRSF	PIRSF002211. Ribosomal_L30_bac-type. 1 hit.
SUPFAM	SSF55129. Ribosomal_L30. 1 hit.
TIGRFAMs	TIGR01308. rpmD_bact. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C6WTF1_METML

Accession

Primary (citable) accession number: C6WTF1

Entry history

Integrated into UniProtKB/TrEMBL:	September 22, 2009
Last sequence update:	September 22, 2009
Last modified:	May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)