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C6WTB9 (C6WTB9_METML) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:Mmol_0331 EMBL ACT47241.1, Mmol_0343 EMBL ACT47253.1
OrganismMethylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) [Complete proteome] [HAMAP] EMBL ACT47241.1
Taxonomic identifier583345 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaMethylophilalesMethylophilaceaeMethylotenera

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
C6WTB9 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: 6E8D45477106F660

FASTA39642,726
        10         20         30         40         50         60 
MAKGKFERTK PHVNVGTIGH VDHGKTTLTA AITTVLTKKF GGEAKAYDQI DAAPEEKARG 

        70         80         90        100        110        120 
ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI 

       130        140        150        160        170        180 
LLARQVGVPY IVVFLNKADM VDDAELLELV EMEVRDLLSK YDFPGDDTPI VKGSAKLALE 

       190        200        210        220        230        240 
GDQSPIGEPA IFALADALDS YIPMPERAVD GTFLMPVEDV FSISGRGTVV TGRIERGIVK 

       250        260        270        280        290        300 
VGDEIEIVGL KDTLKTTCTG VEMFRKLLDQ GMAGDNVGVL LRGTKREEIE RGQVLAKAGS 

       310        320        330        340        350        360 
IKPHTKFTAE IYVLGKDEGG RHTPFFQGYR PQFYFRTTDV TGAVELPAGT EMVMPGDNVS 

       370        380        390 
ITVTLIAPIA MEEGLRFAIR EGGRTVGAGV VAKIIE 

« Hide

References

« Hide 'large scale' references
[1]"Complete sequence of Methylotenera mobilis JLW8."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K.M., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Kayluzhnaya M., Chistoserdova L.
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JLW8 / ATCC BAA-1282 / DSM 17540.
[2]"Genomes of three methylotrophs from a single niche reveal the genetic and metabolic divergence of the methylophilaceae."
Lapidus A., Clum A., Labutti K., Kaluzhnaya M.G., Lim S., Beck D.A., Glavina Del Rio T., Nolan M., Mavromatis K., Huntemann M., Lucas S., Lidstrom M.E., Ivanova N., Chistoserdova L.
J. Bacteriol. 193:3757-3764(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: JLW8 EMBL ACT47241.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001672 Genomic DNA. Translation: ACT47241.1.
CP001672 Genomic DNA. Translation: ACT47253.1.
RefSeqYP_003047768.1. NC_012968.1.
YP_003047780.1. NC_012968.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING583345.Mmol_0343.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT47241; ACT47241; Mmol_0331.
ACT47253; ACT47253; Mmol_0343.
GeneID8171433.
8171446.
KEGGmmb:Mmol_0331.
mmb:Mmol_0343.
PATRIC22610819. VBIMetMob89187_0336.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0050.
HOGENOMHOG000229290.
KOK02358.
OMAGTEMCMP.
OrthoDBEOG6R5C6X.

Enzyme and pathway databases

BioCycMMOB583345:GHCF-345-MONOMER.
MMOB583345:GHCF-358-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6WTB9_METML
AccessionPrimary (citable) accession number: C6WTB9
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: June 11, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)