SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

C6WQ29

- C6WQ29_ACTMD

UniProt

C6WQ29 - C6WQ29_ACTMD

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Alpha-amylase

Gene
Amir_1130
Organism
Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro
  3. starch binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciAMIR446462:GH7R-1162-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Amir_1130Imported
OrganismiActinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)Imported
Taxonomic identifieri446462 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeActinosynnema
ProteomesiUP000002213: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424 PredictedImportedAdd
BLAST
Chaini25 – 566542 PredictedImportedPRO_5000498275Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi446462.Amir_1130.

Structurei

3D structure databases

ProteinModelPortaliC6WQ29.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000253313.
KOiK01176.
OMAiGQNIFVV.
OrthoDBiEOG6RZB1B.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMiSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51166. CBM20. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C6WQ29-1 [UniParc]FASTAAdd to Basket

« Hide

MAPPARKIAL FAAGALIAGV VAAGATQLAS TPPTATATPP GAKTVTATLF    50
QWTFDRVATE CATTLGPKGY GYVEVSPATE HIQGGTWWTS YQPVSYRIAG 100
RLGSEAQFRN MVSACHNAGV KVIADAVINH MSAGSGTGTG GTRYTKYAYP 150
GHYGDQDFHT CRTDINDYRN RDNVQNCELS GLSDLNTGSE YVRSEIAEYL 200
NNLLSMGVDG FRIDAAKHMP AADLSAIKAK LTKRDAFWVH EVIYGAGEAV 250
QPGEYTGSGD VDEFRYAYDL KRVFTSENLA YLKNFGEGWG HLPSGQARPF 300
VDNWDTERNG STLSYKDGSN YTLANVFMLA WPYGSPQVYS GYEFSNKDQG 350
PPAPGECYSS GWECQHRWPQ IANMVGFRNT TSGTAVTNWW DNGRNAIAFG 400
RGDKGYAVVN RESSAVSRTF QTSLPAGTYC DVQRDGCTAT HVVNSAGQFT 450
ATVNANEAIA LHVGAMGNGS NPGAGAAAFS VNATTVMGQN IFVVGDHASL 500
GGWDPARAVA LSSASYPLWK TSVSLPNGTA FAYKYIRKEA NGSVTWESGA 550
NRTSTSPATL NDTWRN 566
Length:566
Mass (Da):60,650
Last modified:September 22, 2009 - v1
Checksum:i481AA7CC87358AAE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001630 Genomic DNA. Translation: ACU35085.1.
RefSeqiYP_003098931.1. NC_013093.1.

Genome annotation databases

EnsemblBacteriaiACU35085; ACU35085; Amir_1130.
GeneIDi8325305.
KEGGiami:Amir_1130.
PATRICi20765065. VBIActMir80567_1151.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001630 Genomic DNA. Translation: ACU35085.1 .
RefSeqi YP_003098931.1. NC_013093.1.

3D structure databases

ProteinModelPortali C6WQ29.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 446462.Amir_1130.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACU35085 ; ACU35085 ; Amir_1130 .
GeneIDi 8325305.
KEGGi ami:Amir_1130.
PATRICi 20765065. VBIActMir80567_1151.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000253313.
KOi K01176.
OMAi GQNIFVV.
OrthoDBi EOG6RZB1B.

Enzyme and pathway databases

BioCyci AMIR446462:GH7R-1162-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view ]
SUPFAMi SSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEi PS51166. CBM20. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971.

Entry informationi

Entry nameiC6WQ29_ACTMD
AccessioniPrimary (citable) accession number: C6WQ29
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: July 9, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi