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C6WQ29

- C6WQ29_ACTMD

UniProt

C6WQ29 - C6WQ29_ACTMD

Protein

Alpha-amylase

Gene

Amir_1130

Organism
Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 36 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro
    3. starch binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciAMIR446462:GH7R-1162-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:Amir_1130Imported
    OrganismiActinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)Imported
    Taxonomic identifieri446462 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeActinosynnema
    ProteomesiUP000002213: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2424 PotentialImportedAdd
    BLAST
    Chaini25 – 566542 PotentialImportedPRO_5000498275Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi446462.Amir_1130.

    Structurei

    3D structure databases

    ProteinModelPortaliC6WQ29.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000253313.
    KOiK01176.
    OMAiGQNIFVV.
    OrthoDBiEOG6RZB1B.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR013784. Carb-bd-like_fold.
    IPR002044. CBM_fam20.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF00686. CBM_20. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    SM01065. CBM_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF49452. SSF49452. 1 hit.
    SSF51445. SSF51445. 1 hit.
    PROSITEiPS51166. CBM20. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    C6WQ29-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAPPARKIAL FAAGALIAGV VAAGATQLAS TPPTATATPP GAKTVTATLF    50
    QWTFDRVATE CATTLGPKGY GYVEVSPATE HIQGGTWWTS YQPVSYRIAG 100
    RLGSEAQFRN MVSACHNAGV KVIADAVINH MSAGSGTGTG GTRYTKYAYP 150
    GHYGDQDFHT CRTDINDYRN RDNVQNCELS GLSDLNTGSE YVRSEIAEYL 200
    NNLLSMGVDG FRIDAAKHMP AADLSAIKAK LTKRDAFWVH EVIYGAGEAV 250
    QPGEYTGSGD VDEFRYAYDL KRVFTSENLA YLKNFGEGWG HLPSGQARPF 300
    VDNWDTERNG STLSYKDGSN YTLANVFMLA WPYGSPQVYS GYEFSNKDQG 350
    PPAPGECYSS GWECQHRWPQ IANMVGFRNT TSGTAVTNWW DNGRNAIAFG 400
    RGDKGYAVVN RESSAVSRTF QTSLPAGTYC DVQRDGCTAT HVVNSAGQFT 450
    ATVNANEAIA LHVGAMGNGS NPGAGAAAFS VNATTVMGQN IFVVGDHASL 500
    GGWDPARAVA LSSASYPLWK TSVSLPNGTA FAYKYIRKEA NGSVTWESGA 550
    NRTSTSPATL NDTWRN 566
    Length:566
    Mass (Da):60,650
    Last modified:September 22, 2009 - v1
    Checksum:i481AA7CC87358AAE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001630 Genomic DNA. Translation: ACU35085.1.
    RefSeqiYP_003098931.1. NC_013093.1.

    Genome annotation databases

    EnsemblBacteriaiACU35085; ACU35085; Amir_1130.
    GeneIDi8325305.
    KEGGiami:Amir_1130.
    PATRICi20765065. VBIActMir80567_1151.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001630 Genomic DNA. Translation: ACU35085.1 .
    RefSeqi YP_003098931.1. NC_013093.1.

    3D structure databases

    ProteinModelPortali C6WQ29.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 446462.Amir_1130.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACU35085 ; ACU35085 ; Amir_1130 .
    GeneIDi 8325305.
    KEGGi ami:Amir_1130.
    PATRICi 20765065. VBIActMir80567_1151.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000253313.
    KOi K01176.
    OMAi GQNIFVV.
    OrthoDBi EOG6RZB1B.

    Enzyme and pathway databases

    BioCyci AMIR446462:GH7R-1162-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR013784. Carb-bd-like_fold.
    IPR002044. CBM_fam20.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF00686. CBM_20. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    SM01065. CBM_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49452. SSF49452. 1 hit.
    SSF51445. SSF51445. 1 hit.
    PROSITEi PS51166. CBM20. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971Imported.

    Entry informationi

    Entry nameiC6WQ29_ACTMD
    AccessioniPrimary (citable) accession number: C6WQ29
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 36 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3