C6WJP4 (C6WJP4_ACTMD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Type III secretion system inner membrane R protein EMBL ACU36269.1

Gene names

Ordered Locus Names:

Amir_2329

Organism

Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) [Complete proteome] [HAMAP]

Taxonomic identifier

446462 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Actinosynnema › Actinosynnema mirum

Protein attributes

Sequence length	256 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Membrane; Multi-pass membrane protein By similarity RuleBase RU003841.
Sequence similarities	Belongs to the fliR/mopE/spaR family. RuleBase RU003841

Ontologies

Keywords
Cellular component	Membrane
Domain	Signal EMBL ACU36269.1 Transmembrane RuleBase RU003841
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	protein targeting Inferred from electronic annotation. Source: InterPro
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 22	22	Potential EMBL ACU36269.1
	Chain	23 – 256	234	Potential EMBL ACU36269.1		PRO_5000497983

Sequences

	Sequence		Length	Mass (Da)
	C6WJP4 [UniParc]. Last modified September 22, 2009. Version 1. Checksum: 85C4A3CB67652E0A	FASTA	256	26,182
	10 20 30 40 50 60 MNLDIGVNVL VALLLAATRS AAWLMVCPPF NGKAIPMTVK GMLAVGLALP VVPRLSAGSV 70 80 90 100 110 120 PSLDTWSLVI AAGEQVVVGA GLGFLTAVIF AGVQAAGDLL DVFGGFSLAF AFDPMSFSGN 130 140 150 160 170 180 NAVLGRFYGL LATTLLFVTG SHQVIIRGFT LSYDAIPLDG GLSLGRLGTL LTTGLGQLLL 190 200 210 220 230 240 SAAQIAGPLI VVLFCADVGL GLLNRIAPAL NPFQIGFPAK IGLTLVLVGL TMPMLPMSVE 250 NIAKHAASAV MEAIGR

References

[1]

"Complete genome sequence of Actinosynnema mirum type strain (101)." Land M., Lapidus A., Mayilraj S., Chen F., Copeland A., Glavina del Rio T., Nolan M., Lucas S., Tice H., Cheng J.-F., Chertkov O., Bruce D., Goodwin L., Pitluck S., Rohde M., Goeker M., Pati A., Ivanova N. , Mavromatis K., Chen A., Palaniappan K., Hauser L., Chang Y.-J., Jeffries C.C., Brettin T., Detter J.C., Han C., Chain P., Tindall B.J., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.-P. Stand. Genomic Sci. 1:46-53(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001630 Genomic DNA. Translation: ACU36269.1.
RefSeq	YP_003100115.1. NC_013093.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	446462.Amir_2329.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACU36269; ACU36269; Amir_2329.
GeneID	8326518.
KEGG	ami:Amir_2329.
PATRIC	20767577. VBIActMir80567_2399.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1684.
HOGENOM	HOG000253545.
KO	K02421.
OMA	QLNIFAI.
ProtClustDB	CLSK961005.
Enzyme and pathway databases
BioCyc	AMIR446462:GH7R-2374-MONOMER.
Family and domain databases
InterPro	IPR002010. T3SS_IM_R. [Graphical view]
Pfam	PF01311. Bac_export_1. 1 hit. [Graphical view]
PRINTS	PR00953. TYPE3IMRPROT.
ProtoNet	Search...

Entry information

Entry name

C6WJP4_ACTMD

Accession

Primary (citable) accession number: C6WJP4

Entry history

Integrated into UniProtKB/TrEMBL:	September 22, 2009
Last sequence update:	September 22, 2009
Last modified:	May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)