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Protein
Submitted name:

Type III secretion system inner membrane R protein

Gene

Amir_2329

Organism
Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciAMIR446462:GH7R-2374-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Type III secretion system inner membrane R proteinImported
Gene namesi
Ordered Locus Names:Amir_2329Imported
OrganismiActinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)Imported
Taxonomic identifieri446462 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaPseudonocardialesPseudonocardiaceaeActinosynnema
ProteomesiUP000002213 Componenti: Chromosome

Subcellular locationi

  • Cell membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222 PotentialImportedAdd
BLAST
Chaini23 – 256234 PotentialImportedPRO_5000497983Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi446462.Amir_2329.

Family & Domainsi

Sequence similaritiesi

Belongs to the fliR/mopE/spaR family.UniRule annotation

Keywords - Domaini

SignalImported, TransmembraneUniRule annotation

Phylogenomic databases

eggNOGiCOG1684.
HOGENOMiHOG000253545.
KOiK02421.
OMAiIFINGMM.
OrthoDBiEOG6FBWVR.

Family and domain databases

InterProiIPR002010. T3SS_IM_R.
[Graphical view]
PfamiPF01311. Bac_export_1. 1 hit.
[Graphical view]
PRINTSiPR00953. TYPE3IMRPROT.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C6WJP4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNLDIGVNVL VALLLAATRS AAWLMVCPPF NGKAIPMTVK GMLAVGLALP
60 70 80 90 100
VVPRLSAGSV PSLDTWSLVI AAGEQVVVGA GLGFLTAVIF AGVQAAGDLL
110 120 130 140 150
DVFGGFSLAF AFDPMSFSGN NAVLGRFYGL LATTLLFVTG SHQVIIRGFT
160 170 180 190 200
LSYDAIPLDG GLSLGRLGTL LTTGLGQLLL SAAQIAGPLI VVLFCADVGL
210 220 230 240 250
GLLNRIAPAL NPFQIGFPAK IGLTLVLVGL TMPMLPMSVE NIAKHAASAV

MEAIGR
Length:256
Mass (Da):26,182
Last modified:September 22, 2009 - v1
Checksum:i85C4A3CB67652E0A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001630 Genomic DNA. Translation: ACU36269.1.
RefSeqiWP_015801158.1. NC_013093.1.

Genome annotation databases

EnsemblBacteriaiACU36269; ACU36269; Amir_2329.
KEGGiami:Amir_2329.
PATRICi20767577. VBIActMir80567_2399.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001630 Genomic DNA. Translation: ACU36269.1.
RefSeqiWP_015801158.1. NC_013093.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi446462.Amir_2329.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU36269; ACU36269; Amir_2329.
KEGGiami:Amir_2329.
PATRICi20767577. VBIActMir80567_2399.

Phylogenomic databases

eggNOGiCOG1684.
HOGENOMiHOG000253545.
KOiK02421.
OMAiIFINGMM.
OrthoDBiEOG6FBWVR.

Enzyme and pathway databases

BioCyciAMIR446462:GH7R-2374-MONOMER.

Family and domain databases

InterProiIPR002010. T3SS_IM_R.
[Graphical view]
PfamiPF01311. Bac_export_1. 1 hit.
[Graphical view]
PRINTSiPR00953. TYPE3IMRPROT.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971Imported.

Entry informationi

Entry nameiC6WJP4_ACTMD
AccessioniPrimary (citable) accession number: C6WJP4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: July 22, 2015
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.