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C6WJP4 (C6WJP4_ACTMD) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Amir_2329 EMBL ACU36269.1
OrganismActinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) [Complete proteome] [HAMAP] EMBL ACU36269.1
Taxonomic identifier446462 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeActinosynnema

Protein attributes

Sequence length256 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein By similarity RuleBase RU003841.

Sequence similarities

Belongs to the fliR/mopE/spaR family. RuleBase RU003841

Ontologies

Keywords
   Cellular componentMembrane
   DomainSignal EMBL ACU36269.1
Transmembrane RuleBase RU003841
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processprotein targeting

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2222 Potential EMBL ACU36269.1
Chain23 – 256234 Potential EMBL ACU36269.1
PRO_5000497983

Sequences

Sequence LengthMass (Da)Tools
C6WJP4 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: 85C4A3CB67652E0A

FASTA25626,182
        10         20         30         40         50         60 
MNLDIGVNVL VALLLAATRS AAWLMVCPPF NGKAIPMTVK GMLAVGLALP VVPRLSAGSV 

        70         80         90        100        110        120 
PSLDTWSLVI AAGEQVVVGA GLGFLTAVIF AGVQAAGDLL DVFGGFSLAF AFDPMSFSGN 

       130        140        150        160        170        180 
NAVLGRFYGL LATTLLFVTG SHQVIIRGFT LSYDAIPLDG GLSLGRLGTL LTTGLGQLLL 

       190        200        210        220        230        240 
SAAQIAGPLI VVLFCADVGL GLLNRIAPAL NPFQIGFPAK IGLTLVLVGL TMPMLPMSVE 

       250 
NIAKHAASAV MEAIGR 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001630 Genomic DNA. Translation: ACU36269.1.
RefSeqYP_003100115.1. NC_013093.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING446462.Amir_2329.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACU36269; ACU36269; Amir_2329.
GeneID8326518.
KEGGami:Amir_2329.
PATRIC20767577. VBIActMir80567_2399.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1684.
HOGENOMHOG000253545.
KOK02421.
OMATIRTSAW.
OrthoDBEOG6FBWVR.

Enzyme and pathway databases

BioCycAMIR446462:GH7R-2374-MONOMER.

Family and domain databases

InterProIPR002010. T3SS_IM_R.
[Graphical view]
PfamPF01311. Bac_export_1. 1 hit.
[Graphical view]
PRINTSPR00953. TYPE3IMRPROT.
ProtoNetSearch...

Entry information

Entry nameC6WJP4_ACTMD
AccessionPrimary (citable) accession number: C6WJP4
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: May 14, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)