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Protein
Submitted name:

D-alanine--D-alanine ligase

Gene

Amir_4256

Organism
Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. D-alanine-D-alanine ligase activity Source: UniProtKB-EC
  3. metal ion binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciAMIR446462:GH7R-4310-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
D-alanine--D-alanine ligaseImported (EC:6.3.2.4Imported)
Gene namesi
Ordered Locus Names:Amir_4256Imported
OrganismiActinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)Imported
Taxonomic identifieri446462 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeActinosynnema
ProteomesiUP000002213 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi446462.Amir_4256.

Structurei

3D structure databases

ProteinModelPortaliC6WIM1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1181.
HOGENOMiHOG000054607.
KOiK01921.
OMAiWFLEAGL.
OrthoDBiEOG6JDW9F.

Family and domain databases

Gene3Di3.30.1490.20. 1 hit.
3.30.470.20. 2 hits.
InterProiIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
[Graphical view]
PANTHERiPTHR23132. PTHR23132. 1 hit.
PROSITEiPS50975. ATP_GRASP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6WIM1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRVLHLTGS PVSPFFAELS TVYGRGCLGA AADPARYEFL VAHVTPDGRW
60 70 80 90 100
RFPADLTPEA LAAAPRLGLP EALGLIESRS VDVAVPQLFC PPGMTTYRAL
110 120 130 140 150
LDALGVPYPG NPPDVMALGA DKAMTRAVVA AAGVPVPEGR VVTSADPCPL
160 170 180 190 200
PPPFVVKPVD ADNSDGLTLV HDRADYHAAL DAAFACSPRR RALVERYVPP
210 220 230 240 250
GREVRCGVLV RSGVPTPLPL EEYPLPSGVR PRADKLADDG GGSLSLVAKA
260 270 280 290 300
DGRSWIVDHD DPVTAAVQEQ ALRCHEALGC RDYSLFDFRI DPEGRPWFLE
310 320 330
AGLYCSFAPT SVITTMAGAA GIGLAELFAE AVTTAARRG
Length:339
Mass (Da):35,841
Last modified:September 22, 2009 - v1
Checksum:i75B5758039D64E35
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001630 Genomic DNA. Translation: ACU38111.1.
RefSeqiYP_003101957.1. NC_013093.1.

Genome annotation databases

EnsemblBacteriaiACU38111; ACU38111; Amir_4256.
KEGGiami:Amir_4256.
PATRICi20771530. VBIActMir80567_4370.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001630 Genomic DNA. Translation: ACU38111.1.
RefSeqiYP_003101957.1. NC_013093.1.

3D structure databases

ProteinModelPortaliC6WIM1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi446462.Amir_4256.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU38111; ACU38111; Amir_4256.
KEGGiami:Amir_4256.
PATRICi20771530. VBIActMir80567_4370.

Phylogenomic databases

eggNOGiCOG1181.
HOGENOMiHOG000054607.
KOiK01921.
OMAiWFLEAGL.
OrthoDBiEOG6JDW9F.

Enzyme and pathway databases

BioCyciAMIR446462:GH7R-4310-MONOMER.

Family and domain databases

Gene3Di3.30.1490.20. 1 hit.
3.30.470.20. 2 hits.
InterProiIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
[Graphical view]
PANTHERiPTHR23132. PTHR23132. 1 hit.
PROSITEiPS50975. ATP_GRASP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971Imported.

Entry informationi

Entry nameiC6WIM1_ACTMD
AccessioniPrimary (citable) accession number: C6WIM1
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: April 1, 2015
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.