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C6WBG0

- C6WBG0_ACTMD

UniProt

C6WBG0 - C6WBG0_ACTMD

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Amir_1579

Organism
Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 33 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciAMIR446462:GH7R-1619-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Amir_1579Imported
    OrganismiActinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)Imported
    Taxonomic identifieri446462 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeActinosynnema
    ProteomesiUP000002213: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi446462.Amir_1579.

    Structurei

    3D structure databases

    ProteinModelPortaliC6WBG0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222508.
    KOiK01971.
    OMAiTELPERC.
    OrthoDBiEOG63NMFT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C6WBG0-1 [UniParc]FASTAAdd to Basket

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    MPLPLTPPVQ PMLATSADAI PTTSDLLFEP KWDGYRCLVF RDGSEVVLQS    50
    RGGKPLNRYF PEVEAALRGS ALPDRVVLDG ELVVSLDGRL DFDALTERIH 100
    PAASRVALLS ERTPAGFVAF DLLALGDEVL LDRPTSDRRA ALEDVITPSG 150
    ALHLTPCTGD VELARRWFGL FEGAGLDGVV GKAAGGAYLP GKRAMVKVKH 200
    ARTAECVVAG LRWHKDTEPG TAAGSLLLGL HDDAGVLHHV GVVGSFKAAE 250
    RRSLAEELTP LITDGEHPWV GHSDERRTPG GTNRWRKESD WTPLTPERVL 300
    EVSYSQTEGA APARLRHNGQ FRRWRPDRDA ASCRYDQLDQ PARYDLAAVL 350
    RGEVRKAR 358
    Length:358
    Mass (Da):39,092
    Last modified:September 22, 2009 - v1
    Checksum:i8C22B1334B20BCDE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001630 Genomic DNA. Translation: ACU35528.1.
    RefSeqiWP_015800417.1. NC_013093.1.
    YP_003099374.1. NC_013093.1.

    Genome annotation databases

    EnsemblBacteriaiACU35528; ACU35528; Amir_1579.
    GeneIDi8325763.
    KEGGiami:Amir_1579.
    PATRICi20765999. VBIActMir80567_1610.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001630 Genomic DNA. Translation: ACU35528.1 .
    RefSeqi WP_015800417.1. NC_013093.1.
    YP_003099374.1. NC_013093.1.

    3D structure databases

    ProteinModelPortali C6WBG0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 446462.Amir_1579.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACU35528 ; ACU35528 ; Amir_1579 .
    GeneIDi 8325763.
    KEGGi ami:Amir_1579.
    PATRICi 20765999. VBIActMir80567_1610.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222508.
    KOi K01971.
    OMAi TELPERC.
    OrthoDBi EOG63NMFT.

    Enzyme and pathway databases

    BioCyci AMIR446462:GH7R-1619-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971Imported.

    Entry informationi

    Entry nameiC6WBG0_ACTMD
    AccessioniPrimary (citable) accession number: C6WBG0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 33 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3