DNA polymerase LigD, polymerase domain protein - Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)

Preferred order of sections

Names and origin

Protein names

Submitted name:
DNA polymerase LigD, polymerase domain protein EMBL ACU35520.1

Gene names

Ordered Locus Names:

Amir_1571

Organism

Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) [Complete proteome] [HAMAP]

Taxonomic identifier

446462 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Actinosynnema ›

Protein attributes

Sequence length	330 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	DNA primase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

C6WBF2 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: 277FE16760457C61
Show »

FASTA

330

36,601

        10         20         30         40         50         60 
MAQALELTVG ERVVRVSNPD KVYFPERGIT KRQVVEYYLA VAEPLLAVLR DRPTTLKRFV 

        70         80         90        100        110        120 
DGVAGEAFYQ KRVPKGAPEW VRTVGVRFPS GRPAEQVRPT EAAVLAWAAN LGTLDFHPWP 

       130        140        150        160        170        180 
VRAGDTDHPD ELRVDLDPQP GTGFREAVEV AGVLREVLGE LGMTGYPKTS GGRGVHVAVR 

       190        200        210        220        230        240 
IRPEWDFVDV RHAVIALGRE VERRAPDLAT TSWWKEERGR KVFLDFNQAA RDRTIASAWS 

       250        260        270        280        290        300 
VRGTPGATVS TPVTWESLGE ADPVAFDVRT VPDYLRDVGD PHAGLDGEAF GIEELLGWYA 

       310        320        330 
NDPRGELPYP PDYPKMPGEP PRVQPSRKRG

« Hide

References

[1]

"Complete genome sequence of Actinosynnema mirum type strain (101)."
Land M., Lapidus A., Mayilraj S., Chen F., Copeland A., Glavina del Rio T., Nolan M., Lucas S., Tice H., Cheng J.-F., Chertkov O., Bruce D., Goodwin L., Pitluck S., Rohde M., Goeker M., Pati A., Ivanova N.

Klenk H.-P.
Stand. Genomic Sci. 1:46-53(2009)
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001630 Genomic DNA. Translation: ACU35520.1.
RefSeq	YP_003099366.1. NC_013093.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	446462.Amir_1571.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACU35520; ACU35520; Amir_1571.
GeneID	8325755.
KEGG	ami:Amir_1571.
PATRIC	20765985. VBIActMir80567_1603.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3285.
HOGENOM	HOG000244654.
KO	K01971.
OMA	PPEYPKM.
ProtClustDB	CLSK2536191.
Enzyme and pathway databases
BioCyc	AMIR446462:GH7R-1611-MONOMER.
Family and domain databases
InterPro	IPR002755. DNA_primase_S. IPR014145. LigD_pol. [Graphical view]
Pfam	PF01896. DNA_primase_S. 1 hit. [Graphical view]
TIGRFAMs	TIGR02778. ligD_pol. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C6WBF2_ACTMD

Accession

Primary (citable) accession number: C6WBF2

Entry history

Integrated into UniProtKB/TrEMBL:	September 22, 2009
Last sequence update:	September 22, 2009
Last modified:	May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Preferred order of sections

Names and origin

Protein attributes

Ontologies

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

Entry information