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Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

Dfer_3085

Organism
Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciDFER471854:GI24-3094-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
Ordered Locus Names:Dfer_3085Imported
OrganismiDyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)Imported
Taxonomic identifieri471854 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeDyadobacter
ProteomesiUP000002011 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi471854.Dfer_3085.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
KOiK01971.
OMAiKPLWPEA.
OrthoDBiEOG6FV833.

Family and domain databases

InterProiIPR014145. LigD_pol_dom.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

C6W6G0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKKAEITHP EKIYWPDEHI TKGELIDYYR NIATYILPYM KNRPLSLRRQ
60 70 80 90 100
PNGIKDEGFF QKDASDSVPE WIKTFEILAE STGKMVNYHV VNDVESLLYI
110 120 130 140 150
ANLGCIEMNP WNSTINKLEN PDWVVMDIDP SAKNTFDDVI DVALTIKQIL
160 170 180 190 200
GEMDVEGFCK TSGASGMHVY IPFGRKYDYD QARDFAELLA HMVVERIPKI
210 220 230 240 250
TTLERSLSKR KKNQIYVDYL QNRIGQTLAC AYSARPKPGA TVSTPLEWSE
260 270 280 290
VQHGLSPKDF TIKNIFDRLD KKGDLFKGVL GKGINLKKAL QKLSVPAQD
Length:299
Mass (Da):34,135
Last modified:September 22, 2009 - v1
Checksum:i45C2709808B5BACF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001619 Genomic DNA. Translation: ACT94300.1.
RefSeqiWP_015812548.1. NC_013037.1.
YP_003087465.1. NC_013037.1.

Genome annotation databases

EnsemblBacteriaiACT94300; ACT94300; Dfer_3085.
KEGGidfe:Dfer_3085.
PATRICi21827670. VBIDyaFer416_3182.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001619 Genomic DNA. Translation: ACT94300.1.
RefSeqiWP_015812548.1. NC_013037.1.
YP_003087465.1. NC_013037.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi471854.Dfer_3085.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACT94300; ACT94300; Dfer_3085.
KEGGidfe:Dfer_3085.
PATRICi21827670. VBIDyaFer416_3182.

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
KOiK01971.
OMAiKPLWPEA.
OrthoDBiEOG6FV833.

Enzyme and pathway databases

BioCyciDFER471854:GI24-3094-MONOMER.

Family and domain databases

InterProiIPR014145. LigD_pol_dom.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700827 / DSM 18053 / NS114Imported.

Entry informationi

Entry nameiC6W6G0_DYAFD
AccessioniPrimary (citable) accession number: C6W6G0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: April 29, 2015
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.