C6W5L7 (C6W5L7_DYAFD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Exo-alpha-sialidase EMBL ACT94235.1
EC=3.2.1.18 EMBL ACT94235.1

Gene names

Ordered Locus Names:

Dfer_3020

Organism

Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) [Complete proteome] [HAMAP] EMBL ACT94235.1

Taxonomic identifier

471854 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Cytophagia › Cytophagales › Cytophagaceae › Dyadobacter › Dyadobacter fermentans

Protein attributes

Sequence length	388 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ACT94235.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	exo-alpha-(2->3)-sialidase activity Inferred from electronic annotation. Source: EC exo-alpha-(2->6)-sialidase activity Inferred from electronic annotation. Source: EC exo-alpha-(2->8)-sialidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6W5L7 [UniParc]. Last modified September 22, 2009. Version 1. Checksum: 90812E1049FE600D	FASTA	388	42,772
	10 20 30 40 50 60 MRYLKYTLLL KLFVIMHYAI GQTPVFVSGS DGYKSYRIPA IVRTPAGDLL AFAEGRVGGS 70 80 90 100 110 120 GDFGDIDIVM KRSRDGGKTW SAMQVVANYN DLQAGNPAPV MDLTDPAFPK GRLFLFFNTG 130 140 150 160 170 180 NNHEGEVRKG KGLREVWYKT STDNGATWSE PENITTQVHR PKQPTVNAAY DFAEDWRSYA 190 200 210 220 230 240 NTPGHALQLT EGKLKGRIYI PANHSAGDPK PKFTDYQAHG FYTDDHGKTF KLSETISVEG 250 260 270 280 290 300 GNEATAAELS GGRLLFNARN QKGDVRARIV AISSDGGAKW DTTFFDQNLP DPVCEGSILT 310 320 330 340 350 360 IGKSKGNNIL AFCNAADTQA RDNLTLRISF DDGKTWAKSY PVDKSTAGEK DFTAYSDIVK 370 380 TGKQAIGVLY ERDGYKSIVF KEIRWDAK

References

[1]

"Complete genome sequence of Dyadobacter fermentans type strain (NS114)." Lang E., Lapidus A., Chertkov O., Brettin T., Detter J.C., Han C., Copeland A., Glavina del Rio T., Nolan M., Chen F., Lucas S., Tice H., Cheng J.-F., Land M., Hauser L., Chang Y.-J., Jeffries C.C., Kopitz M. , Bruce D., Goodwin L., Pitluck S., Ovchinnikova G., Pati A., Ivanova N., Mavromatis K., Chen A., Palaniappan K., Chain P., Bristow J., Dalin E., Eisen J.A., Markowitz V., Hugenholtz P., Goeker M., Rohde M., Kyrpides N.C., Klenk H.-P. Stand. Genomic Sci. 1:133-140(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700827 / DSM 18053 / NS114.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001619 Genomic DNA. Translation: ACT94235.1.
RefSeq	YP_003087400.1. NC_013037.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	471854.Dfer_3020.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACT94235; ACT94235; Dfer_3020.
GeneID	8226594.
KEGG	dfe:Dfer_3020.
PATRIC	21827534. VBIDyaFer416_3114.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4409.
HOGENOM	HOG000252336.
KO	K01186.
OMA	YEANGNI.
ProtClustDB	CLSK2816122.
Enzyme and pathway databases
BioCyc	DFER471854:GI24-3029-MONOMER.
Family and domain databases
Gene3D	2.120.10.10. 1 hit.
InterPro	IPR026856. Sialidase_fam. IPR011040. Sialidases. [Graphical view]
PANTHER	PTHR10628. PTHR10628. 1 hit.
SUPFAM	SSF50939. Sialidase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C6W5L7_DYAFD

Accession

Primary (citable) accession number: C6W5L7

Entry history

Integrated into UniProtKB/TrEMBL:	September 22, 2009
Last sequence update:	September 22, 2009
Last modified:	May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)