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C6W5K9 (C6W5K9_DYAFD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp HAMAP MF_01445
Alternative name(s):
t(6)A37 threonylcarbamoyladenosine biosynthesis protein HAMAP MF_01445
Gene names
Name:gcp HAMAP MF_01445
Ordered Locus Names:Dfer_3012
OrganismDyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) [Complete proteome] [HAMAP]
Taxonomic identifier471854 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Cytophagia › Cytophagales › Cytophagaceae › Dyadobacter

Protein attributes

Sequence length342 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t6A37) in tRNAs that read codons beginning with adenine By similarity. HAMAP MF_01445

Subcellular location

Cytoplasm By similarity HAMAP MF_01445 SAAS SAAS017860.

Sequence similarities

Belongs to the KAE1 / YgjD family. HAMAP MF_01445

Ontologies

Keywords
   Biological processtRNA processing HAMAP MF_01445 SAAS SAAS017860
   Cellular componentCytoplasm HAMAP MF_01445 SAAS SAAS017860
   Molecular functionHydrolase
Protease EMBL ACT94227.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processproteolysis

Inferred from electronic annotation. Source: UniProtKB-KW

threonylcarbamoyladenosine biosynthetic process

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionmetalloendopeptidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C6W5K9 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: 91E073AA95A1D46A

FASTA34236,925
        10         20         30         40         50         60 
MLNFANIFHS MNILAIESSC DETSAAVITN GNIRSNVVAT QLIHTHYGGV VPELASRAHQ 

        70         80         90        100        110        120 
QHILPVVDKA LNDAKIAKKD LDAIAFTKGP GLLGALLVGT SFAKSMALGL DIPLIEINHM 

       130        140        150        160        170        180 
QAHVLAHFID DPKPAFPFLC LTVSGGHTQI VKVTGPLEME IIGETRDDAV GEAFDKTAKL 

       190        200        210        220        230        240 
LDLPYPGGPL IDKYAAQGNP QAYPFPLPEM PGLDFSFSGI KTSFLYFLQK QVRQNPAFVQ 

       250        260        270        280        290        300 
ENLADICASI QFTLIDILLK KLKKASRETG IKEIAIAGGV SANSGLRRSL TELGAQLGWN 

       310        320        330        340 
VYIPAFEYCT DNAAMIAIAA HFKFAAGDFC DQTVSPLARM EF

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001619 Genomic DNA. Translation: ACT94227.1.
RefSeqYP_003087392.1. NC_013037.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGC6W5K9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8226585.
GenomeReviewsGene locus Dfer_3012 in contig CP001619_GR.
KEGGdfe:Dfer_3012.
PATRIC21827514. VBIDyaFer416_3105.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAPAVGVHH.
ProtClustDBPRK09604.

Family and domain databases

HAMAPMF_01445. gcp.
[Tree]
InterProIPR022450. Pept_M22_O-sialoglycopept.
IPR000905. Peptidase_M22.
IPR017860. Peptidase_M22_CS.
IPR017861. Peptidase_M22_subgr.
[Graphical view]
KOK01409.
PfamPF00814. Peptidase_M22. 1 hit.
[Graphical view]
PRINTSPR00789. OSIALOPTASE.
TIGRFAMsTIGR03723. Bact_gcp. 1 hit.
TIGR00329. Gcp_kae1. 1 hit.
PROSITEPS01016. GLYCOPROTEASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6W5K9_DYAFD
AccessionPrimary (citable) accession number: C6W5K9
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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