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C6W4V0 (C6W4V0_DYAFD) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length442 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. HAMAP-Rule MF_00455 RuleBase RU000609 SAAS SAAS001998

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00455 RuleBase RU000610 SAAS SAAS001998

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00455 RuleBase RU000610 SAAS SAAS001998.

Sequence similarities

Belongs to the xylose isomerase family. HAMAP-Rule MF_00455

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1071 By similarity HAMAP-Rule MF_00455
Active site1101 By similarity HAMAP-Rule MF_00455
Metal binding2381Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2741Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2741Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2771Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3021Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding3131Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3151Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3451Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
C6W4V0 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: C52FBDAE999C4DEA

FASTA44249,255
        10         20         30         40         50         60 
MSILLGEQEY FKGIGKISFE GPETDNPLAY RWYDENRVIA GKTMKDHLRF AVAYWHTFCG 

        70         80         90        100        110        120 
AGLDPFGGPT LFYPWDKKAD AVDRAKDKAD AAFEFITKLG LPYYCFHDVD VVDYDDDVRT 

       130        140        150        160        170        180 
NEKRLQALTA YLGEKQKASG VKLLWGTANL FGHHRYMNGA STNPDFDVVA HAGAQIKMAL 

       190        200        210        220        230        240 
DATIALGGEN YVFWGGREGY MSLLNTDMKR EQEHFAQMLK ISVAYARANG FKGKFFIEPK 

       250        260        270        280        290        300 
PCEPTKHQYD YDAATVIGFL RQHDLLADFS LNLEVNHATL AGHTFEHELQ VAADAGILGS 

       310        320        330        340        350        360 
IDANRGDYQN GWDTDQFPND IAEWTRALLV ILNAGGLQGG GINFDAKRRR NSTDVDDVFH 

       370        380        390        400        410        420 
AHIGGIDTVA RALVIADKII QNGAYDEIRK NRYASFDGGK GADFEKGALK LEDLFELAAT 

       430        440 
KGEPATTSGK QEYLENLINR FL 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001619 Genomic DNA. Translation: ACT95924.1.
RefSeqYP_003089089.1. NC_013037.1.

3D structure databases

ProteinModelPortalC6W4V0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING471854.Dfer_4723.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT95924; ACT95924; Dfer_4723.
GeneID8228329.
KEGGdfe:Dfer_4723.
PATRIC21831065. VBIDyaFer416_4851.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2115.
HOGENOMHOG000252293.
KOK01805.
OMALFHAHIG.
OrthoDBEOG62NX4R.

Enzyme and pathway databases

BioCycDFER471854:GI24-4765-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02630. xylose_isom_A. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6W4V0_DYAFD
AccessionPrimary (citable) accession number: C6W4V0
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: June 11, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)