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C6W4M0

- C6W4M0_DYAFD

UniProt

C6W4M0 - C6W4M0_DYAFD

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Protein

Superoxide dismutase

Gene

Dfer_2906

Organism
Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciDFER471854:GI24-2914-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Dfer_2906Imported
OrganismiDyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)Imported
Taxonomic identifieri471854 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeDyadobacter
ProteomesiUP000002011: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2727 PotentialImportedAdd
BLAST
Chaini28 – 240213 PotentialImportedPRO_5000497057Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi471854.Dfer_2906.

Structurei

3D structure databases

ProteinModelPortaliC6W4M0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0605.
HOGENOMiHOG000013584.
KOiK04564.
OMAiVENLINW.
OrthoDBiEOG63NMNT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C6W4M0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNRTDFLRTL AGSALTVGTL AEQSFAGVAQ TSGSILAETA PFKQAPLPYD
60 70 80 90 100
FGALEPSIDK LTMEIHYGKH HTAYIKNLND AVKGTEWEKK SLEDIIKGVS
110 120 130 140 150
KAPAAIRNNG GGHWNHTFFW EVMGPKKAAA PSGAVADAIN GQFGSFEKFK
160 170 180 190 200
EEFGKAAATR FGSGWAWLVA KGGKLAVGST PNQDNPLMDV SDFKGTPILG
210 220 230 240
IDVWEHAYYL HYQNKRPDYV KAFWDVVNWD KVAENLKKAK
Length:240
Mass (Da):26,292
Last modified:September 22, 2009 - v1
Checksum:i4A9B95BAD06E049F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001619 Genomic DNA. Translation: ACT94121.1.
RefSeqiWP_015812371.1. NC_013037.1.
YP_003087286.1. NC_013037.1.

Genome annotation databases

EnsemblBacteriaiACT94121; ACT94121; Dfer_2906.
GeneIDi8226479.
KEGGidfe:Dfer_2906.
PATRICi21827296. VBIDyaFer416_2996.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001619 Genomic DNA. Translation: ACT94121.1 .
RefSeqi WP_015812371.1. NC_013037.1.
YP_003087286.1. NC_013037.1.

3D structure databases

ProteinModelPortali C6W4M0.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 471854.Dfer_2906.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACT94121 ; ACT94121 ; Dfer_2906 .
GeneIDi 8226479.
KEGGi dfe:Dfer_2906.
PATRICi 21827296. VBIDyaFer416_2996.

Phylogenomic databases

eggNOGi COG0605.
HOGENOMi HOG000013584.
KOi K04564.
OMAi VENLINW.
OrthoDBi EOG63NMNT.

Enzyme and pathway databases

BioCyci DFER471854:GI24-2914-MONOMER.

Family and domain databases

InterProi IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view ]
PANTHERi PTHR11404. PTHR11404. 1 hit.
Pfami PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000349. SODismutase. 1 hit.
PRINTSi PR01703. MNSODISMTASE.
SUPFAMi SSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEi PS00088. SOD_MN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700827 / DSM 18053 / NS114Imported.

Entry informationi

Entry nameiC6W4M0_DYAFD
AccessioniPrimary (citable) accession number: C6W4M0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: October 29, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3