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C6W4M0

- C6W4M0_DYAFD

UniProt

C6W4M0 - C6W4M0_DYAFD

Protein

Superoxide dismutase

Gene

Dfer_2906

Organism
Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Enzyme and pathway databases

    BioCyciDFER471854:GI24-2914-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:Dfer_2906Imported
    OrganismiDyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)Imported
    Taxonomic identifieri471854 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeDyadobacter
    ProteomesiUP000002011: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2727 PotentialImportedAdd
    BLAST
    Chaini28 – 240213 PotentialImportedPRO_5000497057Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi471854.Dfer_2906.

    Structurei

    3D structure databases

    ProteinModelPortaliC6W4M0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG0605.
    HOGENOMiHOG000013584.
    KOiK04564.
    OMAiVENLINW.
    OrthoDBiEOG63NMNT.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    C6W4M0-1 [UniParc]FASTAAdd to Basket

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    MNRTDFLRTL AGSALTVGTL AEQSFAGVAQ TSGSILAETA PFKQAPLPYD    50
    FGALEPSIDK LTMEIHYGKH HTAYIKNLND AVKGTEWEKK SLEDIIKGVS 100
    KAPAAIRNNG GGHWNHTFFW EVMGPKKAAA PSGAVADAIN GQFGSFEKFK 150
    EEFGKAAATR FGSGWAWLVA KGGKLAVGST PNQDNPLMDV SDFKGTPILG 200
    IDVWEHAYYL HYQNKRPDYV KAFWDVVNWD KVAENLKKAK 240
    Length:240
    Mass (Da):26,292
    Last modified:September 22, 2009 - v1
    Checksum:i4A9B95BAD06E049F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001619 Genomic DNA. Translation: ACT94121.1.
    RefSeqiWP_015812371.1. NC_013037.1.
    YP_003087286.1. NC_013037.1.

    Genome annotation databases

    EnsemblBacteriaiACT94121; ACT94121; Dfer_2906.
    GeneIDi8226479.
    KEGGidfe:Dfer_2906.
    PATRICi21827296. VBIDyaFer416_2996.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001619 Genomic DNA. Translation: ACT94121.1 .
    RefSeqi WP_015812371.1. NC_013037.1.
    YP_003087286.1. NC_013037.1.

    3D structure databases

    ProteinModelPortali C6W4M0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 471854.Dfer_2906.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACT94121 ; ACT94121 ; Dfer_2906 .
    GeneIDi 8226479.
    KEGGi dfe:Dfer_2906.
    PATRICi 21827296. VBIDyaFer416_2996.

    Phylogenomic databases

    eggNOGi COG0605.
    HOGENOMi HOG000013584.
    KOi K04564.
    OMAi VENLINW.
    OrthoDBi EOG63NMNT.

    Enzyme and pathway databases

    BioCyci DFER471854:GI24-2914-MONOMER.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700827 / DSM 18053 / NS114Imported.

    Entry informationi

    Entry nameiC6W4M0_DYAFD
    AccessioniPrimary (citable) accession number: C6W4M0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3