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Protein

Superoxide dismutase

Gene

Dfer_2906

Organism
Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi66Divalent metal cationUniRule annotation1
Metal bindingi116Divalent metal cationUniRule annotation1
Metal bindingi202Divalent metal cationUniRule annotation1
Metal bindingi206Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotationImported
LigandMetal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciDFER471854:G1GEU-2888-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Dfer_2906Imported
OrganismiDyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)Imported
Taxonomic identifieri471854 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeDyadobacter
Proteomesi
  • UP000002011 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi471854.Dfer_2906

Structurei

3D structure databases

ProteinModelPortaliC6W4M0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini42 – 123Sod_Fe_NInterPro annotationAdd BLAST82
Domaini131 – 234Sod_Fe_CInterPro annotationAdd BLAST104

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili75 – 95Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG4105CK4 Bacteria
COG0605 LUCA
HOGENOMiHOG000013584
KOiK04564
OMAiYEGWKGE
OrthoDBiPOG091H03Q7

Family and domain databases

Gene3Di1.10.287.990, 1 hit
2.40.500.20, 1 hit
InterProiView protein in InterPro
IPR001189 Mn/Fe_SOD
IPR019833 Mn/Fe_SOD_BS
IPR019832 Mn/Fe_SOD_C
IPR019831 Mn/Fe_SOD_N
IPR036324 Mn/Fe_SOD_N_sf
IPR036314 SOD_C_sf
PfamiView protein in Pfam
PF02777 Sod_Fe_C, 1 hit
PF00081 Sod_Fe_N, 1 hit
PIRSFiPIRSF000349 SODismutase, 1 hit
PRINTSiPR01703 MNSODISMTASE
SUPFAMiSSF46609 SSF46609, 1 hit
SSF54719 SSF54719, 1 hit
PROSITEiView protein in PROSITE
PS00088 SOD_MN, 1 hit

Sequencei

Sequence statusi: Complete.

C6W4M0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNRTDFLRTL AGSALTVGTL AEQSFAGVAQ TSGSILAETA PFKQAPLPYD
60 70 80 90 100
FGALEPSIDK LTMEIHYGKH HTAYIKNLND AVKGTEWEKK SLEDIIKGVS
110 120 130 140 150
KAPAAIRNNG GGHWNHTFFW EVMGPKKAAA PSGAVADAIN GQFGSFEKFK
160 170 180 190 200
EEFGKAAATR FGSGWAWLVA KGGKLAVGST PNQDNPLMDV SDFKGTPILG
210 220 230 240
IDVWEHAYYL HYQNKRPDYV KAFWDVVNWD KVAENLKKAK
Length:240
Mass (Da):26,292
Last modified:September 22, 2009 - v1
Checksum:i4A9B95BAD06E049F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001619 Genomic DNA Translation: ACT94121.1
RefSeqiWP_015812371.1, NC_013037.1

Genome annotation databases

EnsemblBacteriaiACT94121; ACT94121; Dfer_2906
KEGGidfe:Dfer_2906

Similar proteinsi

Entry informationi

Entry nameiC6W4M0_DYAFD
AccessioniPrimary (citable) accession number: C6W4M0
Entry historyiIntegrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: March 28, 2018
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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