C6W0V1 (C6W0V1_DYAFD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414

Gene names

Ordered Locus Names:

Dfer_4203

Organism

Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) [Complete proteome] [HAMAP] EMBL ACT95406.1

Taxonomic identifier

471854 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Cytophagia › Cytophagales › Cytophagaceae › Dyadobacter › Dyadobacter fermentans

Protein attributes

Sequence length	201 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414
Sequence similarities	Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU000414 EMBL ACT95406.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6W0V1 [UniParc]. Last modified September 22, 2009. Version 1. Checksum: A52DD0A5BFA40BB3	FASTA	201	22,067
	10 20 30 40 50 60 MAFTLDPLPY ANNALEPHFD ALTMEIHHDR HHQAYVTNLN AAVAGTELEG KTIEELLAGI 70 80 90 100 110 120 SKAPAPVRNN GGGHWNHSFF WKSLSSNGGG EPTGELGKAI TAKFGSFQAF KDEFKKAATG 130 140 150 160 170 180 RFGSGWAWLI KSGDGVAITS TPNQDNPLMD IAEVKGTPII GLDVWEHAYY LKYQNKRPDY 190 200 IDAYWNVVDW KAADALYTAA K

References

[1]

"Complete genome sequence of Dyadobacter fermentans type strain (NS114)." Lang E., Lapidus A., Chertkov O., Brettin T., Detter J.C., Han C., Copeland A., Glavina del Rio T., Nolan M., Chen F., Lucas S., Tice H., Cheng J.-F., Land M., Hauser L., Chang Y.-J., Jeffries C.C., Kopitz M. , Bruce D., Goodwin L., Pitluck S., Ovchinnikova G., Pati A., Ivanova N., Mavromatis K., Chen A., Palaniappan K., Chain P., Bristow J., Dalin E., Eisen J.A., Markowitz V., Hugenholtz P., Goeker M., Rohde M., Kyrpides N.C., Klenk H.-P. Stand. Genomic Sci. 1:133-140(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700827 / DSM 18053 / NS114.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001619 Genomic DNA. Translation: ACT95406.1.
RefSeq	YP_003088571.1. NC_013037.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	471854.Dfer_4203.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACT95406; ACT95406; Dfer_4203.
GeneID	8227805.
KEGG	dfe:Dfer_4203.
PATRIC	21830005. VBIDyaFer416_4325.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0605.
HOGENOM	HOG000013583.
KO	K04564.
OMA	ETMTIHH.
ProtClustDB	CLSK2816370.
Enzyme and pathway databases
BioCyc	DFER471854:GI24-4240-MONOMER.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS00088. SOD_MN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C6W0V1_DYAFD

Accession

Primary (citable) accession number: C6W0V1

Entry history

Integrated into UniProtKB/TrEMBL:	September 22, 2009
Last sequence update:	September 22, 2009
Last modified:	May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)