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Protein

Beta-galactosidase

Gene

Dfer_4139

Organism
Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.UniRule annotationSAAS annotation

GO - Molecular functioni

  1. beta-galactosidase activity Source: UniProtKB-EC
  2. carbohydrate binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationSAAS annotation, Hydrolase

Enzyme and pathway databases

BioCyciDFER471854:GI24-4173-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-galactosidaseUniRule annotationSAAS annotation (EC:3.2.1.23UniRule annotationSAAS annotation)
Alternative name(s):
LactaseUniRule annotation
Gene namesi
Ordered Locus Names:Dfer_4139Imported
OrganismiDyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)Imported
Taxonomic identifieri471854 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeDyadobacter
ProteomesiUP000002011: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. beta-galactosidase complex Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2626 PotentialImportedAdd
BLAST
Chaini27 – 11291103 PotentialImportedPRO_5000496598Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi471854.Dfer_4139.

Structurei

3D structure databases

ProteinModelPortaliC6W015.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 2 family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG3250.
HOGENOMiHOG000252444.
KOiK01190.
OMAiNIESHEL.
OrthoDBiEOG6XWV0T.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
2.60.40.320. 2 hits.
2.70.98.10. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR004199. B-gal_small/dom_5.
IPR011013. Gal_mutarotase_SF_dom.
IPR008979. Galactose-bd-like.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR023232. Glyco_hydro_2_AS.
IPR023230. Glyco_hydro_2_CS.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02929. Bgal_small_N. 1 hit.
PF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSiPR00132. GLHYDRLASE2.
SMARTiSM01038. Bgal_small_N. 1 hit.
[Graphical view]
SUPFAMiSSF49303. SSF49303. 2 hits.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
SSF74650. SSF74650. 1 hit.
PROSITEiPS00719. GLYCOSYL_HYDROL_F2_1. 1 hit.
PS00608. GLYCOSYL_HYDROL_F2_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C6W015-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQFSTPRAFL TLFFLIQIVH HAAHAQAIPE WQDPQVISIN TEKPRADFFP
60 70 80 90 100
YTTEKAALAM DKKGSFVQSL NGSWKFKWAP HPSKAQLNFY DPKVSDASWD
110 120 130 140 150
NIPVPSNWQV VGAREGRKYD RPIFSNIKHP FKATPPRINA DTNAVGMYRT
160 170 180 190 200
TFTVADVKDK QIFLHFGGVQ SACYVWLNGV AIGYHEDGMT PFEFDVTEDV
210 220 230 240 250
KAGVNNLAVE VINWSDGSYL EDQDYWRLSG IFRDVNLLLL PKVVLTDYSV
260 270 280 290 300
RTILDANHDN ATLKLSAFVK NYGQQPIHAH QVLFTLYDAA KNVVTTPVSQ
310 320 330 340 350
MVGTLEMGRE GAVRAEMPVP SPAKWSAETP NLYMLTVQLM NSDGKVIEAT
360 370 380 390 400
SQRVGFRDVK IKGGQLLVNG KAITIKGVNR HEFDPETGRV ISRESMMRDI
410 420 430 440 450
TLMKQHNINA VRTSHYPNAS EWYDLCDQYG LYVMDEANIE SHELWSKGII
460 470 480 490 500
LADNPQWRSA FLARGNAMVE RDKNHPSVII WSLGNESGMG QNFVDMGDFI
510 520 530 540 550
KLADPTRPIH YEGRKDYKPT TLSSFDIISV MYPSTQDMTE LVKKDKTRPL
560 570 580 590 600
IVCEYAHGMG NSVGNLKEYW DVIEKYPTMQ GGFIWDWVDQ GLKLKRPDGT
610 620 630 640 650
DYWDYFNYLD GANAGDGLVN PDRTPQPELN EVKKVYQYVK FEMPDTLKTG
660 670 680 690 700
EKALTLHNTY DFQSLNAFEL VWSVIENGKP AGKGGSIANL NALPRHKQQL
710 720 730 740 750
TIPYELPAAS KPNAEYFLNL SLRLKDATLW APKGHEVAWH QVPVVKPATP
760 770 780 790 800
RPNLSLYGER PLRIAQISSA RVQVAGQDFT VVFDKNEGRM ISFKNKKEEM
810 820 830 840 850
LESGPYANFW RVPTDNDEGG AAKSYATQWR NFGLDTLERV SSEMKTQRLT
860 870 880 890 900
AQIYKVTLSQ TLKQPKGEMD VQSVYMVYAS GDIHVQNTFT PRGEWPPLAK
910 920 930 940 950
IGMQLRMPAT FTKTQWFGNG PHETYADRKT SAKVGIYAGT VAEQHFPYIT
960 970 980 990 1000
PQENGNKTGI RWATVTNAEG TGLLVLSDTA FNFNVHDYTD KDLLAAKRRA
1010 1020 1030 1040 1050
AVLARGTSTT VNIDLAQMGL GGDDSWSPRV HEAYLLPAKT YSYAFRLRPI
1060 1070 1080 1090 1100
ESTSNIEQIA AVRLPYVDQK ETNESVSTAE TAAATEEAVT EDEEEEEAVT
1110 1120
APVRKTTVKK APVRKKVVRK KKPTRRRRR
Length:1,129
Mass (Da):127,242
Last modified:September 22, 2009 - v1
Checksum:i385DCC7E16B634BF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001619 Genomic DNA. Translation: ACT95342.1.
RefSeqiYP_003088507.1. NC_013037.1.

Genome annotation databases

EnsemblBacteriaiACT95342; ACT95342; Dfer_4139.
GeneIDi8227737.
KEGGidfe:Dfer_4139.
PATRICi21829869. VBIDyaFer416_4260.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001619 Genomic DNA. Translation: ACT95342.1.
RefSeqiYP_003088507.1. NC_013037.1.

3D structure databases

ProteinModelPortaliC6W015.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi471854.Dfer_4139.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACT95342; ACT95342; Dfer_4139.
GeneIDi8227737.
KEGGidfe:Dfer_4139.
PATRICi21829869. VBIDyaFer416_4260.

Phylogenomic databases

eggNOGiCOG3250.
HOGENOMiHOG000252444.
KOiK01190.
OMAiNIESHEL.
OrthoDBiEOG6XWV0T.

Enzyme and pathway databases

BioCyciDFER471854:GI24-4173-MONOMER.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
2.60.40.320. 2 hits.
2.70.98.10. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR004199. B-gal_small/dom_5.
IPR011013. Gal_mutarotase_SF_dom.
IPR008979. Galactose-bd-like.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR023232. Glyco_hydro_2_AS.
IPR023230. Glyco_hydro_2_CS.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02929. Bgal_small_N. 1 hit.
PF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSiPR00132. GLHYDRLASE2.
SMARTiSM01038. Bgal_small_N. 1 hit.
[Graphical view]
SUPFAMiSSF49303. SSF49303. 2 hits.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
SSF74650. SSF74650. 1 hit.
PROSITEiPS00719. GLYCOSYL_HYDROL_F2_1. 1 hit.
PS00608. GLYCOSYL_HYDROL_F2_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700827 / DSM 18053 / NS114Imported.

Entry informationi

Entry nameiC6W015_DYAFD
AccessioniPrimary (citable) accession number: C6W015
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: March 4, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.