Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

C6W015

- C6W015_DYAFD

UniProt

C6W015 - C6W015_DYAFD

Protein

Beta-galactosidase

Gene

Dfer_4139

Organism
Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.UniRule annotationSAAS annotation

    GO - Molecular functioni

    1. beta-galactosidase activity Source: UniProtKB-EC
    2. carbohydrate binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationSAAS annotationImported, Hydrolase

    Enzyme and pathway databases

    BioCyciDFER471854:GI24-4173-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-galactosidaseUniRule annotation (EC:3.2.1.23UniRule annotation)
    Alternative name(s):
    LactaseUniRule annotation
    Gene namesi
    Ordered Locus Names:Dfer_4139Imported
    OrganismiDyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)Imported
    Taxonomic identifieri471854 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeDyadobacter
    ProteomesiUP000002011: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. beta-galactosidase complex Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2626 PotentialImportedAdd
    BLAST
    Chaini27 – 11291103 PotentialImportedPRO_5000496598Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi471854.Dfer_4139.

    Structurei

    3D structure databases

    ProteinModelPortaliC6W015.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 2 family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG3250.
    HOGENOMiHOG000252444.
    KOiK01190.
    OMAiGHGSPAY.
    OrthoDBiEOG6XWV0T.

    Family and domain databases

    Gene3Di2.60.120.260. 1 hit.
    2.60.40.320. 2 hits.
    2.70.98.10. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR004199. B-gal_small/dom_5.
    IPR011013. Gal_mutarotase_SF_dom.
    IPR008979. Galactose-bd-like.
    IPR014718. Glyco_hydro-type_carb-bd_sub.
    IPR006101. Glyco_hydro_2.
    IPR013812. Glyco_hydro_2/20_Ig-like.
    IPR023232. Glyco_hydro_2_AS.
    IPR023230. Glyco_hydro_2_CS.
    IPR006102. Glyco_hydro_2_Ig-like.
    IPR006104. Glyco_hydro_2_N.
    IPR006103. Glyco_hydro_2_TIM.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF02929. Bgal_small_N. 1 hit.
    PF00703. Glyco_hydro_2. 1 hit.
    PF02836. Glyco_hydro_2_C. 1 hit.
    PF02837. Glyco_hydro_2_N. 1 hit.
    [Graphical view]
    PRINTSiPR00132. GLHYDRLASE2.
    SMARTiSM01038. Bgal_small_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF49303. SSF49303. 2 hits.
    SSF49785. SSF49785. 1 hit.
    SSF51445. SSF51445. 1 hit.
    SSF74650. SSF74650. 1 hit.
    PROSITEiPS00719. GLYCOSYL_HYDROL_F2_1. 1 hit.
    PS00608. GLYCOSYL_HYDROL_F2_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    C6W015-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQFSTPRAFL TLFFLIQIVH HAAHAQAIPE WQDPQVISIN TEKPRADFFP     50
    YTTEKAALAM DKKGSFVQSL NGSWKFKWAP HPSKAQLNFY DPKVSDASWD 100
    NIPVPSNWQV VGAREGRKYD RPIFSNIKHP FKATPPRINA DTNAVGMYRT 150
    TFTVADVKDK QIFLHFGGVQ SACYVWLNGV AIGYHEDGMT PFEFDVTEDV 200
    KAGVNNLAVE VINWSDGSYL EDQDYWRLSG IFRDVNLLLL PKVVLTDYSV 250
    RTILDANHDN ATLKLSAFVK NYGQQPIHAH QVLFTLYDAA KNVVTTPVSQ 300
    MVGTLEMGRE GAVRAEMPVP SPAKWSAETP NLYMLTVQLM NSDGKVIEAT 350
    SQRVGFRDVK IKGGQLLVNG KAITIKGVNR HEFDPETGRV ISRESMMRDI 400
    TLMKQHNINA VRTSHYPNAS EWYDLCDQYG LYVMDEANIE SHELWSKGII 450
    LADNPQWRSA FLARGNAMVE RDKNHPSVII WSLGNESGMG QNFVDMGDFI 500
    KLADPTRPIH YEGRKDYKPT TLSSFDIISV MYPSTQDMTE LVKKDKTRPL 550
    IVCEYAHGMG NSVGNLKEYW DVIEKYPTMQ GGFIWDWVDQ GLKLKRPDGT 600
    DYWDYFNYLD GANAGDGLVN PDRTPQPELN EVKKVYQYVK FEMPDTLKTG 650
    EKALTLHNTY DFQSLNAFEL VWSVIENGKP AGKGGSIANL NALPRHKQQL 700
    TIPYELPAAS KPNAEYFLNL SLRLKDATLW APKGHEVAWH QVPVVKPATP 750
    RPNLSLYGER PLRIAQISSA RVQVAGQDFT VVFDKNEGRM ISFKNKKEEM 800
    LESGPYANFW RVPTDNDEGG AAKSYATQWR NFGLDTLERV SSEMKTQRLT 850
    AQIYKVTLSQ TLKQPKGEMD VQSVYMVYAS GDIHVQNTFT PRGEWPPLAK 900
    IGMQLRMPAT FTKTQWFGNG PHETYADRKT SAKVGIYAGT VAEQHFPYIT 950
    PQENGNKTGI RWATVTNAEG TGLLVLSDTA FNFNVHDYTD KDLLAAKRRA 1000
    AVLARGTSTT VNIDLAQMGL GGDDSWSPRV HEAYLLPAKT YSYAFRLRPI 1050
    ESTSNIEQIA AVRLPYVDQK ETNESVSTAE TAAATEEAVT EDEEEEEAVT 1100
    APVRKTTVKK APVRKKVVRK KKPTRRRRR 1129
    Length:1,129
    Mass (Da):127,242
    Last modified:September 22, 2009 - v1
    Checksum:i385DCC7E16B634BF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001619 Genomic DNA. Translation: ACT95342.1.
    RefSeqiWP_015813585.1. NC_013037.1.
    YP_003088507.1. NC_013037.1.

    Genome annotation databases

    EnsemblBacteriaiACT95342; ACT95342; Dfer_4139.
    GeneIDi8227737.
    KEGGidfe:Dfer_4139.
    PATRICi21829869. VBIDyaFer416_4260.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001619 Genomic DNA. Translation: ACT95342.1 .
    RefSeqi WP_015813585.1. NC_013037.1.
    YP_003088507.1. NC_013037.1.

    3D structure databases

    ProteinModelPortali C6W015.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 471854.Dfer_4139.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACT95342 ; ACT95342 ; Dfer_4139 .
    GeneIDi 8227737.
    KEGGi dfe:Dfer_4139.
    PATRICi 21829869. VBIDyaFer416_4260.

    Phylogenomic databases

    eggNOGi COG3250.
    HOGENOMi HOG000252444.
    KOi K01190.
    OMAi GHGSPAY.
    OrthoDBi EOG6XWV0T.

    Enzyme and pathway databases

    BioCyci DFER471854:GI24-4173-MONOMER.

    Family and domain databases

    Gene3Di 2.60.120.260. 1 hit.
    2.60.40.320. 2 hits.
    2.70.98.10. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR004199. B-gal_small/dom_5.
    IPR011013. Gal_mutarotase_SF_dom.
    IPR008979. Galactose-bd-like.
    IPR014718. Glyco_hydro-type_carb-bd_sub.
    IPR006101. Glyco_hydro_2.
    IPR013812. Glyco_hydro_2/20_Ig-like.
    IPR023232. Glyco_hydro_2_AS.
    IPR023230. Glyco_hydro_2_CS.
    IPR006102. Glyco_hydro_2_Ig-like.
    IPR006104. Glyco_hydro_2_N.
    IPR006103. Glyco_hydro_2_TIM.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF02929. Bgal_small_N. 1 hit.
    PF00703. Glyco_hydro_2. 1 hit.
    PF02836. Glyco_hydro_2_C. 1 hit.
    PF02837. Glyco_hydro_2_N. 1 hit.
    [Graphical view ]
    PRINTSi PR00132. GLHYDRLASE2.
    SMARTi SM01038. Bgal_small_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49303. SSF49303. 2 hits.
    SSF49785. SSF49785. 1 hit.
    SSF51445. SSF51445. 1 hit.
    SSF74650. SSF74650. 1 hit.
    PROSITEi PS00719. GLYCOSYL_HYDROL_F2_1. 1 hit.
    PS00608. GLYCOSYL_HYDROL_F2_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700827 / DSM 18053 / NS114Imported.

    Entry informationi

    Entry nameiC6W015_DYAFD
    AccessioniPrimary (citable) accession number: C6W015
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3