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C6VYK6 (C6VYK6_DYAFD) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ACT93361.1
Gene names
Ordered Locus Names:Dfer_2138 EMBL ACT93361.1
OrganismDyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) [Complete proteome] [HAMAP] EMBL ACT93361.1
Taxonomic identifier471854 [NCBI]
Taxonomic lineageBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeDyadobacter

Protein attributes

Sequence length420 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ACT93361.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C6VYK6 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: 6B9E7D968535C566

FASTA42045,811
        10         20         30         40         50         60 
MERITARYYI ETPYAVEKAA AVLAGEQSSG TFVAVPGETE ELKNRFAARV ELIELLETVS 

        70         80         90        100        110        120 
EPAIPGASSP DGQYRRAHVE VSWSVENFGH NLPMLVSTLQ GNLYEITQFT GLKLLDIHFP 

       130        140        150        160        170        180 
ETYASHYRGP RFGIGGCRSL TGVDSGRPLI GTIIKPSVGL TPAQTAETVG ILAQAGIDFV 

       190        200        210        220        230        240 
KDDELMASTA NSLFEERVDA VMQVINRHAD RTGKKVMYAF NISDEMDEML RKYEHIVRSG 

       250        260        270        280        290        300 
GTCAMISINS TGLAAAKRIC DIGELAIHGH RNGWGMLNRH PLLGIEFPAY QKLWRLAGVD 

       310        320        330        340        350        360 
QLHVNGIRNK FWESDDSVVR SIASCLHHAP LDKPVLPVVS SGQWGGQAFE TYRRTQTTNL 

       370        380        390        400        410        420 
LYMAGGGIMA HPGGPAAGVT ALQQAWEAAV GGLTLAEAAR DYPEFGKSVE KFGQLHFDRA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001619 Genomic DNA. Translation: ACT93361.1.
RefSeqYP_003086526.1. NC_013037.1.

3D structure databases

ProteinModelPortalC6VYK6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING471854.Dfer_2138.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT93361; ACT93361; Dfer_2138.
GeneID8225710.
KEGGdfe:Dfer_2138.
PATRIC21825704. VBIDyaFer416_2201.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230831.
KOK01601.
OMALAHFCSE.
OrthoDBEOG62K1SK.
ProtClustDBCLSK2546562.

Enzyme and pathway databases

BioCycDFER471854:GI24-2145-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6VYK6_DYAFD
AccessionPrimary (citable) accession number: C6VYK6
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: January 22, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)