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C6VYK6

- C6VYK6_DYAFD

UniProt

C6VYK6 - C6VYK6_DYAFD

Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Dfer_2138

Organism
Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbon fixation Source: InterPro

    Keywords - Molecular functioni

    LyaseImported

    Enzyme and pathway databases

    BioCyciDFER471854:GI24-2145-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
    Gene namesi
    Ordered Locus Names:Dfer_2138Imported
    OrganismiDyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)Imported
    Taxonomic identifieri471854 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeDyadobacter
    ProteomesiUP000002011: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi471854.Dfer_2138.

    Structurei

    3D structure databases

    ProteinModelPortaliC6VYK6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO large chain family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1850.
    HOGENOMiHOG000230831.
    KOiK01601.
    OMAiMSIFKGV.
    OrthoDBiEOG62K1SK.

    Family and domain databases

    Gene3Di3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProiIPR020878. RuBisCo_large_chain_AS.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view]
    PfamiPF00016. RuBisCO_large. 1 hit.
    [Graphical view]
    SUPFAMiSSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C6VYK6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MERITARYYI ETPYAVEKAA AVLAGEQSSG TFVAVPGETE ELKNRFAARV    50
    ELIELLETVS EPAIPGASSP DGQYRRAHVE VSWSVENFGH NLPMLVSTLQ 100
    GNLYEITQFT GLKLLDIHFP ETYASHYRGP RFGIGGCRSL TGVDSGRPLI 150
    GTIIKPSVGL TPAQTAETVG ILAQAGIDFV KDDELMASTA NSLFEERVDA 200
    VMQVINRHAD RTGKKVMYAF NISDEMDEML RKYEHIVRSG GTCAMISINS 250
    TGLAAAKRIC DIGELAIHGH RNGWGMLNRH PLLGIEFPAY QKLWRLAGVD 300
    QLHVNGIRNK FWESDDSVVR SIASCLHHAP LDKPVLPVVS SGQWGGQAFE 350
    TYRRTQTTNL LYMAGGGIMA HPGGPAAGVT ALQQAWEAAV GGLTLAEAAR 400
    DYPEFGKSVE KFGQLHFDRA 420
    Length:420
    Mass (Da):45,811
    Last modified:September 22, 2009 - v1
    Checksum:i6B9E7D968535C566
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001619 Genomic DNA. Translation: ACT93361.1.
    RefSeqiYP_003086526.1. NC_013037.1.

    Genome annotation databases

    EnsemblBacteriaiACT93361; ACT93361; Dfer_2138.
    GeneIDi8225710.
    KEGGidfe:Dfer_2138.
    PATRICi21825704. VBIDyaFer416_2201.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001619 Genomic DNA. Translation: ACT93361.1 .
    RefSeqi YP_003086526.1. NC_013037.1.

    3D structure databases

    ProteinModelPortali C6VYK6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 471854.Dfer_2138.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACT93361 ; ACT93361 ; Dfer_2138 .
    GeneIDi 8225710.
    KEGGi dfe:Dfer_2138.
    PATRICi 21825704. VBIDyaFer416_2201.

    Phylogenomic databases

    eggNOGi COG1850.
    HOGENOMi HOG000230831.
    KOi K01601.
    OMAi MSIFKGV.
    OrthoDBi EOG62K1SK.

    Enzyme and pathway databases

    BioCyci DFER471854:GI24-2145-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProi IPR020878. RuBisCo_large_chain_AS.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view ]
    Pfami PF00016. RuBisCO_large. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEi PS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700827 / DSM 18053 / NS114Imported.

    Entry informationi

    Entry nameiC6VYK6_DYAFD
    AccessioniPrimary (citable) accession number: C6VYK6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3