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C6VYK6

- C6VYK6_DYAFD

UniProt

C6VYK6 - C6VYK6_DYAFD

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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Dfer_2138

Organism
Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciDFER471854:GI24-2145-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Dfer_2138Imported
OrganismiDyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)Imported
Taxonomic identifieri471854 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeDyadobacter
ProteomesiUP000002011: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi471854.Dfer_2138.

Structurei

3D structure databases

ProteinModelPortaliC6VYK6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiMSIFKGV.
OrthoDBiEOG62K1SK.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6VYK6 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MERITARYYI ETPYAVEKAA AVLAGEQSSG TFVAVPGETE ELKNRFAARV
60 70 80 90 100
ELIELLETVS EPAIPGASSP DGQYRRAHVE VSWSVENFGH NLPMLVSTLQ
110 120 130 140 150
GNLYEITQFT GLKLLDIHFP ETYASHYRGP RFGIGGCRSL TGVDSGRPLI
160 170 180 190 200
GTIIKPSVGL TPAQTAETVG ILAQAGIDFV KDDELMASTA NSLFEERVDA
210 220 230 240 250
VMQVINRHAD RTGKKVMYAF NISDEMDEML RKYEHIVRSG GTCAMISINS
260 270 280 290 300
TGLAAAKRIC DIGELAIHGH RNGWGMLNRH PLLGIEFPAY QKLWRLAGVD
310 320 330 340 350
QLHVNGIRNK FWESDDSVVR SIASCLHHAP LDKPVLPVVS SGQWGGQAFE
360 370 380 390 400
TYRRTQTTNL LYMAGGGIMA HPGGPAAGVT ALQQAWEAAV GGLTLAEAAR
410 420
DYPEFGKSVE KFGQLHFDRA
Length:420
Mass (Da):45,811
Last modified:September 22, 2009 - v1
Checksum:i6B9E7D968535C566
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001619 Genomic DNA. Translation: ACT93361.1.
RefSeqiYP_003086526.1. NC_013037.1.

Genome annotation databases

EnsemblBacteriaiACT93361; ACT93361; Dfer_2138.
GeneIDi8225710.
KEGGidfe:Dfer_2138.
PATRICi21825704. VBIDyaFer416_2201.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001619 Genomic DNA. Translation: ACT93361.1 .
RefSeqi YP_003086526.1. NC_013037.1.

3D structure databases

ProteinModelPortali C6VYK6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 471854.Dfer_2138.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACT93361 ; ACT93361 ; Dfer_2138 .
GeneIDi 8225710.
KEGGi dfe:Dfer_2138.
PATRICi 21825704. VBIDyaFer416_2201.

Phylogenomic databases

eggNOGi COG1850.
HOGENOMi HOG000230831.
KOi K01601.
OMAi MSIFKGV.
OrthoDBi EOG62K1SK.

Enzyme and pathway databases

BioCyci DFER471854:GI24-2145-MONOMER.

Family and domain databases

Gene3Di 3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProi IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view ]
Pfami PF00016. RuBisCO_large. 1 hit.
[Graphical view ]
SUPFAMi SSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEi PS00157. RUBISCO_LARGE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700827 / DSM 18053 / NS114Imported.

Entry informationi

Entry nameiC6VYK6_DYAFD
AccessioniPrimary (citable) accession number: C6VYK6
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: October 1, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3