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C6VYJ5 (C6VYJ5_DYAFD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
5'-nucleotidase surE 1 HAMAP MF_00060
EC=3.1.3.5 HAMAP MF_00060
Alternative name(s):
Nucleoside 5'-monophosphate phosphohydrolase 1 HAMAP MF_00060
Gene names
Name:surE1 HAMAP MF_00060
Ordered Locus Names:Dfer_0405
OrganismDyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) [Complete proteome] [HAMAP]
Taxonomic identifier471854 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Cytophagia › Cytophagales › Cytophagaceae › Dyadobacter

Protein attributes

Sequence length244 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates By similarity. HAMAP MF_00060

Catalytic activity

A 5'-ribonucleotide + H2O = a ribonucleoside + phosphate. HAMAP MF_00060 SAAS SAAS002828

Cofactor

Binds 1 divalent metal cation per subunit By similarity. HAMAP MF_00060 SAAS SAAS002828

Subcellular location

Cytoplasm By similarity HAMAP MF_00060 SAAS SAAS002828.

Sequence similarities

Belongs to the surE nucleotidase family. HAMAP MF_00060

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding81Divalent metal cation By similarity HAMAP MF_00060
Metal binding91Divalent metal cation By similarity HAMAP MF_00060
Metal binding391Divalent metal cation By similarity HAMAP MF_00060
Metal binding941Divalent metal cation By similarity HAMAP MF_00060

Sequences

Sequence LengthMass (Da)Tools
C6VYJ5 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: 6418CF60B493876A

FASTA24426,806
        10         20         30         40         50         60 
MRILVTNDDG IYSPGIAALA KIAARFGEVK IVAPDVEQSS MGHAITASRP LSYKKSPIEF 

        70         80         90        100        110        120 
EGIDAYRVNG TPADCVALGQ HLWDKPDVVL SGINLGPNLG NAMWHSGTLA AAKQAVLFGI 

       130        140        150        160        170        180 
KGIALSTPTD VEPDFEKLDP FVEKALDLLF KNPHLNLVNV NFPHSPKGVR WTRQSVRLYD 

       190        200        210        220        230        240 
NNIVPALDPM GRKHYWFTVV PLEPAEEGTD RWAIENNFVS ITPLRLDLTN EAELVKAQLA 


YPIT

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001619 Genomic DNA. Translation: ACT91674.1.
RefSeqYP_003084839.1. NC_013037.1.

3D structure databases

ProteinModelPortalC6VYJ5.
ModBaseSearch...

Protein-protein interaction databases

STRINGC6VYJ5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8223971.
GenomeReviewsGene locus Dfer_0405 in contig CP001619_GR.
KEGGdfe:Dfer_0405.
PATRIC21822118. VBIDyaFer416_0415.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAHRTIRVE.
ProtClustDBCLSK738894.

Family and domain databases

HAMAPMF_00060. SurE.
[Tree]
InterProIPR002828. SurE-like_Pase/nucleotidase.
[Graphical view]
Gene3DG3DSA:3.40.1210.10. SurE-like_Pase/nucleotidase. 1 hit.
KOK03787.
PfamPF01975. SurE. 1 hit.
[Graphical view]
SUPFAMSSF64167. SurE-like_Pase/nucleotidase. 1 hit.
TIGRFAMsTIGR00087. SurE. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6VYJ5_DYAFD
AccessionPrimary (citable) accession number: C6VYJ5
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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