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C6VXG3

- C6VXG3_DYAFD

UniProt

C6VXG3 - C6VXG3_DYAFD

Protein
Submitted name:

Alpha amylase catalytic region

Gene

Dfer_2083

Organism
Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 33 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciDFER471854:GI24-2090-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase catalytic regionImported
    Gene namesi
    Ordered Locus Names:Dfer_2083Imported
    OrganismiDyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114)Imported
    Taxonomic identifieri471854 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeDyadobacter
    ProteomesiUP000002011: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi471854.Dfer_2083.

    Structurei

    3D structure databases

    ProteinModelPortaliC6VXG3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000220639.
    KOiK05343.
    OMAiQWSTEPH.
    OrthoDBiEOG6RVFV2.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 2 hits.
    InterProiIPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    C6VXG3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLEELWYKNA VIYSLDLETF MDGNNDGTGD FEGLCNRLDY LHALGLDTIW    50
    LAPFQPTPNR DNGYDISDFY GVDPRHGSSG DFVDFIHKAR KLGIKVIIDL 100
    VVNHTSDEHR WFKESRSSKD NPKRHWYVWS DKRPKGWNKG MVFPGVQKAT 150
    WTRDKKTGDY YFHRFYEFQP DLNTDNPEVR AEINRIMGYW LELGIAGFRV 200
    DAVPFILESP AAEGKSPLHF EYLKEMRRFL QWRRGDAVLL GEANVLPQES 250
    KKYFGENGEG IHLMFNFYVN QYTFYALATA DTRPLIKALE ATREKAPGSQ 300
    WAFFLRNHDE LDLDRLAPEE RQIVFDRFGP EKNMQIYERG IRRRLSPMLG 350
    NRQQTELAYS LMFSFPGTPV IRYGDEIGMG DNLALQERDA VRTPMQWSGE 400
    VNGGFSRANK LIHPVIDEGY YAYEHVNVEH QRRDAGSLLN WMTTLIRLRK 450
    ECPEIGYGEW EIIDTGYREI LGMRYTWRNR SLLIWHNFSE KSLELVVPEN 500
    QAGTGRLIDL MNNIESVLDH KGRHTITLEA YGYRWFKAQL G 541
    Length:541
    Mass (Da):63,147
    Last modified:September 22, 2009 - v1
    Checksum:i02235ACF46F40D11
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001619 Genomic DNA. Translation: ACT93306.1.
    RefSeqiWP_015811558.1. NC_013037.1.
    YP_003086471.1. NC_013037.1.

    Genome annotation databases

    EnsemblBacteriaiACT93306; ACT93306; Dfer_2083.
    GeneIDi8225655.
    KEGGidfe:Dfer_2083.
    PATRICi21825594. VBIDyaFer416_2146.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001619 Genomic DNA. Translation: ACT93306.1 .
    RefSeqi WP_015811558.1. NC_013037.1.
    YP_003086471.1. NC_013037.1.

    3D structure databases

    ProteinModelPortali C6VXG3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 471854.Dfer_2083.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACT93306 ; ACT93306 ; Dfer_2083 .
    GeneIDi 8225655.
    KEGGi dfe:Dfer_2083.
    PATRICi 21825594. VBIDyaFer416_2146.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000220639.
    KOi K05343.
    OMAi QWSTEPH.
    OrthoDBi EOG6RVFV2.

    Enzyme and pathway databases

    BioCyci DFER471854:GI24-2090-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 2 hits.
    InterProi IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700827 / DSM 18053 / NS114Imported.

    Entry informationi

    Entry nameiC6VXG3_DYAFD
    AccessioniPrimary (citable) accession number: C6VXG3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 33 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3