C6VWY3 (C6VWY3_DYAFD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Xylose isomerase domain protein TIM barrel EMBL ACT96883.1

Gene names

Ordered Locus Names:

Dfer_5694

Organism

Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) [Complete proteome] [HAMAP] EMBL ACT96883.1

Taxonomic identifier

471854 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Cytophagia › Cytophagales › Cytophagaceae › Dyadobacter › Dyadobacter fermentans

Protein attributes

Sequence length	300 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Isomerase EMBL ACT96883.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	isomerase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6VWY3 [UniParc]. Last modified September 22, 2009. Version 1. Checksum: 172E47BFDC8BFF97	FASTA	300	33,686
	10 20 30 40 50 60 MNFENIQLGV APINWTNDDM PELGGENTFE QCVSEMALAG FTGCEVGNKF PRDVNVLKKA 70 80 90 100 110 120 LELRGLQICN QWNSYELTTK SFTENRENFT KLLDFLEVMG ARVIGGGETG NSCQGQMNVP 130 140 150 160 170 180 VFEGKGMLST REEWASFTYG LDELGKIARD RGMKLAFHHH MGTCVQTMEE TDRLLNETNP 190 200 210 220 230 240 DYVFLNYDCG HFHFAGEDPV AALKKYIGRT AHIHLKDVRP TILQRVHDER LSFLTAVKNG 250 260 270 280 290 300 VFTVPGDPEG CIDFPSLFAI IRESDYAGWI VLEAEQDPAK ANPLEYAIIA RNFFRSLTGI

References

[1]

"Complete genome sequence of Dyadobacter fermentans type strain (NS114)." Lang E., Lapidus A., Chertkov O., Brettin T., Detter J.C., Han C., Copeland A., Glavina del Rio T., Nolan M., Chen F., Lucas S., Tice H., Cheng J.-F., Land M., Hauser L., Chang Y.-J., Jeffries C.C., Kopitz M. , Bruce D., Goodwin L., Pitluck S., Ovchinnikova G., Pati A., Ivanova N., Mavromatis K., Chen A., Palaniappan K., Chain P., Bristow J., Dalin E., Eisen J.A., Markowitz V., Hugenholtz P., Goeker M., Rohde M., Kyrpides N.C., Klenk H.-P. Stand. Genomic Sci. 1:133-140(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700827 / DSM 18053 / NS114.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001619 Genomic DNA. Translation: ACT96883.1.
RefSeq	YP_003090048.1. NC_013037.1.
3D structure databases
ProteinModelPortal	C6VWY3.
ModBase	Search...
Protein-protein interaction databases
STRING	471854.Dfer_5694.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACT96883; ACT96883; Dfer_5694.
GeneID	8229310.
KEGG	dfe:Dfer_5694.
PATRIC	21833061. VBIDyaFer416_5840.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1082.
HOGENOM	HOG000239720.
KO	K03335.
OMA	DMPDLGK.
Enzyme and pathway databases
BioCyc	DFER471854:GI24-5745-MONOMER.
Family and domain databases
Gene3D	3.20.20.150. 1 hit.
InterPro	IPR013022. Xyl_isomerase-like_TIM-brl. [Graphical view]
Pfam	PF01261. AP_endonuc_2. 1 hit. [Graphical view]
SUPFAM	SSF51658. Xyl_isomerase-like_TIM-brl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C6VWY3_DYAFD

Accession

Primary (citable) accession number: C6VWY3

Entry history

Integrated into UniProtKB/TrEMBL:	September 22, 2009
Last sequence update:	September 22, 2009
Last modified:	May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)