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C6VMQ4 (C6VMQ4_LACPJ) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:lacM EMBL ACT63662.1
Ordered Locus Names:JDM1_2776 EMBL ACT63662.1
OrganismLactobacillus plantarum (strain JDM1) [Complete proteome] [HAMAP] EMBL ACT63662.1
Taxonomic identifier644042 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus

Protein attributes

Sequence length319 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. SAAS SAAS014718

Ontologies

Keywords
   Molecular functionGlycosidase SAAS SAAS014718
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentbeta-galactosidase complex

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-galactosidase activity

Inferred from electronic annotation. Source: InterPro

carbohydrate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C6VMQ4 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: 80E29EA8C7FF6BAF

FASTA31935,204
        10         20         30         40         50         60 
MAYTNNQLHV IYGDGSLGLQ GANFQYLFSY ERGGLESLVV NDKEWLYRTP TPIFWRATTD 

        70         80         90        100        110        120 
NDHGSGFSVK SAQWYAADKF STCQDIELTV DDQPVTPLPI APLNNKYTDH EIATKVSLAY 

       130        140        150        160        170        180 
HFVTTTVPST IVTVTYTVTA DGQINIATHY SGQSDLPELP AFGLRFIMPT TATGFDYTGL 

       190        200        210        220        230        240 
SGETYPDRLA GATHGQFHVD SLPVTPYLVP QECGMHMQTE QVTVTRSTTQ NNADHDNTPF 

       250        260        270        280        290        300 
SLTFSQADAP FAFSCLPYTA AELENATHME ELPLARRTVL SIYGAVRGVG GIDSWGTDVE 

       310 
SPYHIPADQD IDFSFNIHF 

« Hide

References

[1]"Complete genome sequence of Lactobacillus plantarum JDM1."
Zhang Z.Y., Liu C., Zhu Y.Z., Zhong Y., Zhu Y.Q., Zheng H.J., Zhao G.P., Wang S.Y., Guo X.K.
J. Bacteriol. 191:5020-5021(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JDM1 EMBL ACT63662.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001617 Genomic DNA. Translation: ACT63662.1.
RefSeqYP_003064359.1. NC_012984.1.

3D structure databases

ProteinModelPortalC6VMQ4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING644042.JDM1_2776.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT63662; ACT63662; JDM1_2776.
GeneID8187936.
KEGGlpj:JDM1_2776.
PATRIC22246280. VBILacPla68346_2804.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3250.
HOGENOMHOG000111247.
KOK01190.
OMAQWLGADM.
OrthoDBEOG651SX5.
ProtClustDBCLSK912518.

Enzyme and pathway databases

BioCycLPLA644042:GHFY-2854-MONOMER.

Family and domain databases

Gene3D2.70.98.10. 1 hit.
InterProIPR004199. B-gal_small/dom_5.
IPR011013. Gal_mutarotase_SF_dom.
IPR014718. Glyco_hydro-type_carb-bd_sub.
[Graphical view]
PfamPF02929. Bgal_small_N. 1 hit.
[Graphical view]
SMARTSM01038. Bgal_small_N. 1 hit.
[Graphical view]
SUPFAMSSF74650. SSF74650. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6VMQ4_LACPJ
AccessionPrimary (citable) accession number: C6VMQ4
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: April 16, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)