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C6VMK1

- C6VMK1_LACPJ

UniProt

C6VMK1 - C6VMK1_LACPJ

Protein

Glutamate decarboxylase

Gene

gadB

Organism
Lactobacillus plantarum (strain JDM1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 35 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciLPLA644042:GHFY-2800-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Name:gadBImported
    Ordered Locus Names:JDM1_2723Imported
    OrganismiLactobacillus plantarum (strain JDM1)Imported
    Taxonomic identifieri644042 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
    ProteomesiUP000002057: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi644042.JDM1_2723.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000070228.
    KOiK01580.
    OMAiPTFQINF.
    OrthoDBiEOG6TFCPW.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C6VMK1-1 [UniParc]FASTAAdd to Basket

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    MAMLYGKHNH EAEEYLEPVF GAPSEQHDLP KYRLPKHSLS PREADRLVRD    50
    ELLDEGNSRL NLATFCQTYM EPEAVELMKD TLAKNAIDKS EYPRTAEIEN 100
    RCVNIIANLW HAPDDEHFTG TSTIGSSEAC MLGGLAMKFA WRKRAQAAGL 150
    DLNAHRPNLV ISAGYQVCWE KFCVYWDVDM HVVPMDEQHM ALDVNHVLDY 200
    VDEYTIGIVG IMGITYTGQD DDLAALDKVV THYNHQHPKL PVYIHVDAAS 250
    GGFYTPFIEP QLIWDFRLAN VVSINASGHK YGLVYPGVGW VVWRDRQFLP 300
    PELVFKVSYL GGELPTMAIN FSHSAAQLIG QYYNFIRFGM DGYREIQTKT 350
    HDVARYLAAA LDKVGEFKMI NNGHQLPLIC YQLAPREDRE WTLYDLSDRL 400
    LMNGWQVPTY PLPANLEQQV IQRIVVRADF GMNMAHDFMD DLTKAVHDLN 450
    HAHIVYHHDA APKKYGFTH 469
    Length:469
    Mass (Da):53,536
    Last modified:September 22, 2009 - v1
    Checksum:i4F50FCA1B897CE4B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001617 Genomic DNA. Translation: ACT63609.1.
    RefSeqiWP_015826087.1. NC_012984.1.
    YP_003064306.1. NC_012984.1.

    Genome annotation databases

    EnsemblBacteriaiACT63609; ACT63609; JDM1_2723.
    GeneIDi8188538.
    KEGGilpj:JDM1_2723.
    PATRICi22246174. VBILacPla68346_2752.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001617 Genomic DNA. Translation: ACT63609.1 .
    RefSeqi WP_015826087.1. NC_012984.1.
    YP_003064306.1. NC_012984.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 644042.JDM1_2723.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACT63609 ; ACT63609 ; JDM1_2723 .
    GeneIDi 8188538.
    KEGGi lpj:JDM1_2723.
    PATRICi 22246174. VBILacPla68346_2752.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000070228.
    KOi K01580.
    OMAi PTFQINF.
    OrthoDBi EOG6TFCPW.

    Enzyme and pathway databases

    BioCyci LPLA644042:GHFY-2800-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JDM1Imported.

    Entry informationi

    Entry nameiC6VMK1_LACPJ
    AccessioniPrimary (citable) accession number: C6VMK1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 35 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3