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C6VMK1

- C6VMK1_LACPJ

UniProt

C6VMK1 - C6VMK1_LACPJ

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Protein
Submitted name: Glutamate decarboxylase
Gene
gadB, JDM1_2723
Organism
Lactobacillus plantarum (strain JDM1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciLPLA644042:GHFY-2800-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylaseImported
Gene namesi
Name:gadBImported
Ordered Locus Names:JDM1_2723Imported
OrganismiLactobacillus plantarum (strain JDM1)Imported
Taxonomic identifieri644042 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
ProteomesiUP000002057: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi644042.JDM1_2723.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiPTFQINF.
OrthoDBiEOG6TFCPW.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

C6VMK1-1 [UniParc]FASTAAdd to Basket

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MAMLYGKHNH EAEEYLEPVF GAPSEQHDLP KYRLPKHSLS PREADRLVRD    50
ELLDEGNSRL NLATFCQTYM EPEAVELMKD TLAKNAIDKS EYPRTAEIEN 100
RCVNIIANLW HAPDDEHFTG TSTIGSSEAC MLGGLAMKFA WRKRAQAAGL 150
DLNAHRPNLV ISAGYQVCWE KFCVYWDVDM HVVPMDEQHM ALDVNHVLDY 200
VDEYTIGIVG IMGITYTGQD DDLAALDKVV THYNHQHPKL PVYIHVDAAS 250
GGFYTPFIEP QLIWDFRLAN VVSINASGHK YGLVYPGVGW VVWRDRQFLP 300
PELVFKVSYL GGELPTMAIN FSHSAAQLIG QYYNFIRFGM DGYREIQTKT 350
HDVARYLAAA LDKVGEFKMI NNGHQLPLIC YQLAPREDRE WTLYDLSDRL 400
LMNGWQVPTY PLPANLEQQV IQRIVVRADF GMNMAHDFMD DLTKAVHDLN 450
HAHIVYHHDA APKKYGFTH 469
Length:469
Mass (Da):53,536
Last modified:September 22, 2009 - v1
Checksum:i4F50FCA1B897CE4B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001617 Genomic DNA. Translation: ACT63609.1.
RefSeqiWP_015826087.1. NC_012984.1.
YP_003064306.1. NC_012984.1.

Genome annotation databases

EnsemblBacteriaiACT63609; ACT63609; JDM1_2723.
GeneIDi8188538.
KEGGilpj:JDM1_2723.
PATRICi22246174. VBILacPla68346_2752.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001617 Genomic DNA. Translation: ACT63609.1 .
RefSeqi WP_015826087.1. NC_012984.1.
YP_003064306.1. NC_012984.1.

3D structure databases

ModBasei Search...

Protein-protein interaction databases

STRINGi 644042.JDM1_2723.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACT63609 ; ACT63609 ; JDM1_2723 .
GeneIDi 8188538.
KEGGi lpj:JDM1_2723.
PATRICi 22246174. VBILacPla68346_2752.

Phylogenomic databases

eggNOGi COG0076.
HOGENOMi HOG000070228.
KOi K01580.
OMAi PTFQINF.
OrthoDBi EOG6TFCPW.

Enzyme and pathway databases

BioCyci LPLA644042:GHFY-2800-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JDM1Imported.

Entry informationi

Entry nameiC6VMK1_LACPJ
AccessioniPrimary (citable) accession number: C6VMK1
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: September 3, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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