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C6VIB3

- C6VIB3_LACPJ

UniProt

C6VIB3 - C6VIB3_LACPJ

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Protein

Thymidine kinase

Gene

tdk

Organism
Lactobacillus plantarum (strain JDM1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + thymidine = ADP + thymidine 5'-phosphate.UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. thymidine kinase activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA biosynthetic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

KinaseUniRule annotationImported, Transferase

Keywords - Biological processi

DNA synthesisUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciLPLA644042:GHFY-2057-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Thymidine kinaseUniRule annotation (EC:2.7.1.21UniRule annotation)
Gene namesi
Name:tdkImported
Ordered Locus Names:JDM1_1989Imported
OrganismiLactobacillus plantarum (strain JDM1)Imported
Taxonomic identifieri644042 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
ProteomesiUP000002057: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi644042.JDM1_1989.

Structurei

3D structure databases

ProteinModelPortaliC6VIB3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the thymidine kinase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1435.
HOGENOMiHOG000076391.
KOiK00857.
OMAiELKTVCH.
OrthoDBiEOG69D3J2.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
[Graphical view]
PANTHERiPTHR11441. PTHR11441. 1 hit.
PfamiPF00265. TK. 1 hit.
[Graphical view]
PIRSFiPIRSF035805. TK_cell. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

C6VIB3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSRLAQLFFR YGAMNSGKTI EILKVAHNYE EQDKSVIILT SGLDNRDGVG
60 70 80 90 100
YVASRIGLKR EATPVFDDTN IFEIVKQTNP DAACVLIDEA QFLKKHHVLE
110 120 130 140 150
LADIVDELKI PVMTFGLKND FRNELFEGSK YLLLYADKIE EMKTICWFCR
160
KKSNYEFTVP RWSARL
Length:166
Mass (Da):19,161
Last modified:September 22, 2009 - v1
Checksum:i87AE3A9840B286DB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001617 Genomic DNA. Translation: ACT62876.1.
RefSeqiWP_015825751.1. NC_012984.1.
YP_003063573.1. NC_012984.1.

Genome annotation databases

EnsemblBacteriaiACT62876; ACT62876; JDM1_1989.
GeneIDi8189937.
KEGGilpj:JDM1_1989.
PATRICi22244654. VBILacPla68346_2002.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001617 Genomic DNA. Translation: ACT62876.1 .
RefSeqi WP_015825751.1. NC_012984.1.
YP_003063573.1. NC_012984.1.

3D structure databases

ProteinModelPortali C6VIB3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 644042.JDM1_1989.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACT62876 ; ACT62876 ; JDM1_1989 .
GeneIDi 8189937.
KEGGi lpj:JDM1_1989.
PATRICi 22244654. VBILacPla68346_2002.

Phylogenomic databases

eggNOGi COG1435.
HOGENOMi HOG000076391.
KOi K00857.
OMAi ELKTVCH.
OrthoDBi EOG69D3J2.

Enzyme and pathway databases

BioCyci LPLA644042:GHFY-2057-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
InterProi IPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
[Graphical view ]
PANTHERi PTHR11441. PTHR11441. 1 hit.
Pfami PF00265. TK. 1 hit.
[Graphical view ]
PIRSFi PIRSF035805. TK_cell. 1 hit.
SUPFAMi SSF52540. SSF52540. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JDM1Imported.

Entry informationi

Entry nameiC6VIB3_LACPJ
AccessioniPrimary (citable) accession number: C6VIB3
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: November 26, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3