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C6VIB3

- C6VIB3_LACPJ

UniProt

C6VIB3 - C6VIB3_LACPJ

Protein

Thymidine kinase

Gene

tdk

Organism
Lactobacillus plantarum (strain JDM1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 38 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + thymidine = ADP + thymidine 5'-phosphate.UniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. thymidine kinase activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    KinaseUniRule annotationImported, Transferase

    Keywords - Biological processi

    DNA synthesisUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciLPLA644042:GHFY-2057-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Thymidine kinaseUniRule annotation (EC:2.7.1.21UniRule annotation)
    Gene namesi
    Name:tdkImported
    Ordered Locus Names:JDM1_1989Imported
    OrganismiLactobacillus plantarum (strain JDM1)Imported
    Taxonomic identifieri644042 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
    ProteomesiUP000002057: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi644042.JDM1_1989.

    Structurei

    3D structure databases

    ProteinModelPortaliC6VIB3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the thymidine kinase family.

    Phylogenomic databases

    eggNOGiCOG1435.
    HOGENOMiHOG000076391.
    KOiK00857.
    OMAiELKTVCH.
    OrthoDBiEOG69D3J2.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    InterProiIPR027417. P-loop_NTPase.
    IPR001267. Thymidine_kinase.
    [Graphical view]
    PANTHERiPTHR11441. PTHR11441. 1 hit.
    PfamiPF00265. TK. 1 hit.
    [Graphical view]
    PIRSFiPIRSF035805. TK_cell. 1 hit.
    SUPFAMiSSF52540. SSF52540. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C6VIB3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSRLAQLFFR YGAMNSGKTI EILKVAHNYE EQDKSVIILT SGLDNRDGVG    50
    YVASRIGLKR EATPVFDDTN IFEIVKQTNP DAACVLIDEA QFLKKHHVLE 100
    LADIVDELKI PVMTFGLKND FRNELFEGSK YLLLYADKIE EMKTICWFCR 150
    KKSNYEFTVP RWSARL 166
    Length:166
    Mass (Da):19,161
    Last modified:September 22, 2009 - v1
    Checksum:i87AE3A9840B286DB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001617 Genomic DNA. Translation: ACT62876.1.
    RefSeqiWP_015825751.1. NC_012984.1.
    YP_003063573.1. NC_012984.1.

    Genome annotation databases

    EnsemblBacteriaiACT62876; ACT62876; JDM1_1989.
    GeneIDi8189937.
    KEGGilpj:JDM1_1989.
    PATRICi22244654. VBILacPla68346_2002.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001617 Genomic DNA. Translation: ACT62876.1 .
    RefSeqi WP_015825751.1. NC_012984.1.
    YP_003063573.1. NC_012984.1.

    3D structure databases

    ProteinModelPortali C6VIB3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 644042.JDM1_1989.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACT62876 ; ACT62876 ; JDM1_1989 .
    GeneIDi 8189937.
    KEGGi lpj:JDM1_1989.
    PATRICi 22244654. VBILacPla68346_2002.

    Phylogenomic databases

    eggNOGi COG1435.
    HOGENOMi HOG000076391.
    KOi K00857.
    OMAi ELKTVCH.
    OrthoDBi EOG69D3J2.

    Enzyme and pathway databases

    BioCyci LPLA644042:GHFY-2057-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    InterProi IPR027417. P-loop_NTPase.
    IPR001267. Thymidine_kinase.
    [Graphical view ]
    PANTHERi PTHR11441. PTHR11441. 1 hit.
    Pfami PF00265. TK. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF035805. TK_cell. 1 hit.
    SUPFAMi SSF52540. SSF52540. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JDM1Imported.

    Entry informationi

    Entry nameiC6VIB3_LACPJ
    AccessioniPrimary (citable) accession number: C6VIB3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 38 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3