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C6V0R3 (C6V0R3_ECO5T) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Lysozyme RuleBase RU003788
EC=3.2.1.17 RuleBase RU003788
Gene names
Ordered Locus Names:ECSP_2860
OrganismEscherichia coli O157:H7 (strain TW14359 / EHEC) [Complete proteome] [HAMAP]
Taxonomic identifier544404 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length165 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. RuleBase RU003788

Sequence similarities

Belongs to the glycosyl hydrolase 24 family. RuleBase RU003788

Sequences

Sequence LengthMass (Da)Tools
C6V0R3 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: 82388A6A86C2B35E

FASTA16518,538
        10         20         30         40         50         60 
MPVINTHQNI AAFLDMLAVS EGTANHPLTK NRGYDVIVTG LDGKPEIFTD YSDHPFAHGR 

        70         80         90        100        110        120 
PAKVFNRRGE KSTASGRYQQ LYLFWPHYRK QLALPDFSPL SQDRLAIQLI RERGALDDIR 

       130        140        150        160 
AGRIERAISR CRNIWASLPG AGYGQREHSL EKLVTVWRTA GGVPA

« Hide

References

[1]"Analysis of the genome of the Escherichia coli O157:H7 2006 spinach-associated outbreak isolate indicates candidate genes that may enhance virulence."
Kulasekara B.R., Jacobs M., Zhou Y., Wu Z., Sims E., Saenphimmachak C., Rohmer L., Ritchie J.M., Radey M., McKevitt M., Freeman T.L., Hayden H., Haugen E., Gillett W., Fong C., Chang J., Beskhlebnaya V., Waldor M.K. expand/collapse author list , Samadpour M., Whittam T.S., Kaul R., Brittnacher M., Miller S.I.
Infect. Immun. 77:3713-3721(2009) [PubMed: 19564389] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001368 Genomic DNA. Translation: ACT72649.1.
RefSeqYP_003078725.1. NC_013008.1.

3D structure databases

ProteinModelPortalC6V0R3.
SMRC6V0R3. Positions 7-164.
ModBaseSearch...

Protein-protein interaction databases

STRINGC6V0R3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000170560; EBESCP00000157982; EBESCG00000168856.
GeneID8217426.
GenomeReviewsGene locus ECSP_2860 in contig CP001368_GR.
KEGGetw:ECSP_2860.
PATRIC18389755. VBIEscCol9396_2909.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000012297.
OMACNNIWAS.
ProtClustDBCLSK939539.

Family and domain databases

InterProIPR002196. Glyco_hydro_24.
IPR023346. Lysozyme-like_dom.
[Graphical view]
PfamPF00959. Phage_lysozyme. 1 hit.
[Graphical view]
SUPFAMSSF53955. SSF53955. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6V0R3_ECO5T
AccessionPrimary (citable) accession number: C6V0R3
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: December 14, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info