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C6UYD1

- C6UYD1_ECO5T

UniProt

C6UYD1 - C6UYD1_ECO5T

Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

amyA

Organism
Escherichia coli O157:H7 (strain TW14359 / EHEC)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. calcium ion binding Source: InterPro
    2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciECOL544404:GKCX-2530-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Cytoplasmic alpha-amylaseImported
    Gene namesi
    Name:amyAImported
    Ordered Locus Names:ECSP_2532Imported
    OrganismiEscherichia coli O157:H7 (strain TW14359 / EHEC)Imported
    Taxonomic identifieri544404 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000002056: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi544404.ECSP_2532.

    Structurei

    3D structure databases

    ProteinModelPortaliC6UYD1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000094847.
    KOiK01176.
    OMAiRATKYGD.
    OrthoDBiEOG65QWH3.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR013776. A-amylase_thermo.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C6UYD1-1 [UniParc]FASTAAdd to Basket

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    MRNPTLLQCF HWYYPEGGKL WPELAERADG FNDIGINMVW LPPAYKGASG    50
    GYSVGYDSYD LFDLGEFDQK GSIPTKYGDK VQLLAAIDAL KRNDIAVLLD 100
    VVVNHKMGAD EKEAIRVQRV NADDRTQIDE EIIECEGWTR YTFPARAGQY 150
    SQFIWDFKCF SGIDHIENPN EDGIFKIVND YTGEGWNDQV DDELGNFDYL 200
    MGENIDFRNH AVTEEIKYWA RWVMEQTQCD GFRLDAVKHI PAWFYKEWIE 250
    HVQEVAPKPL FIVAEYWSHE VDKLQTYIDQ VEGKTMLFDA PLQMKFHEAS 300
    RMGRNYDMTQ IFTGTLVEAD PFHAVTLVAN HDTQPLQALE APVEPWFKPL 350
    AYALILLREN GVPSVFYPDL YGAHYEDVGG DGQTYPIDMP IIEQLDELIL 400
    ARQRFAHGVQ TLFFDHPNCI AFSRSGTDEY PGCVVVMSNG DDGEKTIHLG 450
    ENYGNKTWRD FLGNRQESVV TDENGEATFF CNGGSVSVWV IEEVL 495
    Length:495
    Mass (Da):56,612
    Last modified:September 22, 2009 - v1
    Checksum:iF73E9657A8C36F46
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001368 Genomic DNA. Translation: ACT72339.1.
    RefSeqiYP_003078415.1. NC_013008.1.

    Genome annotation databases

    EnsemblBacteriaiACT72339; ACT72339; ECSP_2532.
    GeneIDi8217098.
    KEGGietw:ECSP_2532.
    PATRICi18389102. VBIEscCol9396_2593.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001368 Genomic DNA. Translation: ACT72339.1 .
    RefSeqi YP_003078415.1. NC_013008.1.

    3D structure databases

    ProteinModelPortali C6UYD1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 544404.ECSP_2532.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACT72339 ; ACT72339 ; ECSP_2532 .
    GeneIDi 8217098.
    KEGGi etw:ECSP_2532.
    PATRICi 18389102. VBIEscCol9396_2593.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000094847.
    KOi K01176.
    OMAi RATKYGD.
    OrthoDBi EOG65QWH3.

    Enzyme and pathway databases

    BioCyci ECOL544404:GKCX-2530-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR013776. A-amylase_thermo.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Analysis of the genome of the Escherichia coli O157:H7 2006 spinach-associated outbreak isolate indicates candidate genes that may enhance virulence."
      Kulasekara B.R., Jacobs M., Zhou Y., Wu Z., Sims E., Saenphimmachak C., Rohmer L., Ritchie J.M., Radey M., McKevitt M., Freeman T.L., Hayden H., Haugen E., Gillett W., Fong C., Chang J., Beskhlebnaya V., Waldor M.K.
      , Samadpour M., Whittam T.S., Kaul R., Brittnacher M., Miller S.I.
      Infect. Immun. 77:3713-3721(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: TW14359 / EHECImported.

    Entry informationi

    Entry nameiC6UYD1_ECO5T
    AccessioniPrimary (citable) accession number: C6UYD1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3