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C6UHW4

- C6UHW4_ECOBR

UniProt

C6UHW4 - C6UHW4_ECOBR

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Protein

Lysozyme

Gene

ydfQ-2

Organism
Escherichia coli (strain B / REL606)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins.UniRule annotation

GO - Molecular functioni

  1. lysozyme activity Source: UniProtKB-EC

GO - Biological processi

  1. cell wall macromolecule catabolic process Source: InterPro
  2. cytolysis Source: UniProtKB-KW
  3. defense response to bacterium Source: UniProtKB-KW
  4. peptidoglycan catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Antimicrobial, Bacteriolytic enzymeUniRule annotation, GlycosidaseUniRule annotation, Hydrolase

Names & Taxonomyi

Protein namesi
Recommended name:
LysozymeUniRule annotation (EC:3.2.1.17UniRule annotation)
Gene namesi
Name:ydfQ-2Imported
Ordered Locus Names:ECB_01519Imported
OrganismiEscherichia coli (strain B / REL606)Imported
Taxonomic identifieri413997 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000001632: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi413997.ECB_01519.

Structurei

3D structure databases

ProteinModelPortaliC6UHW4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 24 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG3772.
HOGENOMiHOG000277067.
KOiK01185.
OMAiKDCRIRS.
OrthoDBiEOG6M6JNK.

Family and domain databases

Gene3Di1.10.530.40. 1 hit.
InterProiIPR002196. Glyco_hydro_24.
IPR023346. Lysozyme-like_dom.
IPR023347. Lysozyme_dom.
[Graphical view]
PfamiPF00959. Phage_lysozyme. 1 hit.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.

Sequencei

Sequence statusi: Complete.

C6UHW4-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MNVKIRYSLS AAVLALIAAS APAPDILDQF LDEKEGNHTT AYRDGSGIWT
60 70 80 90 100
ICRGATMVDG KPVIPGMKLS KEKCAQVNAI ERDKALAWVE RNIKVPLTEP
110 120 130 140 150
QKAGIASFCP YNIGPGKCFP STFYKRLNAG DRKGACEAIR WWIKDGGRDC
160 170
RIRSNNCYGQ VIRRDQESAL TCWGIEQ
Length:177
Mass (Da):19,595
Last modified:September 22, 2009 - v1
Checksum:iD982F1F39363BCE5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000819 Genomic DNA. Translation: ACT39186.1.
RefSeqiYP_003044722.1. NC_012967.1.

Genome annotation databases

EnsemblBacteriaiACT39186; ACT39186; ECB_01519.
GeneIDi8179045.
KEGGiebr:ECB_01519.
PATRICi18235127. VBIEscCol118196_1595.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000819 Genomic DNA. Translation: ACT39186.1 .
RefSeqi YP_003044722.1. NC_012967.1.

3D structure databases

ProteinModelPortali C6UHW4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 413997.ECB_01519.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACT39186 ; ACT39186 ; ECB_01519 .
GeneIDi 8179045.
KEGGi ebr:ECB_01519.
PATRICi 18235127. VBIEscCol118196_1595.

Phylogenomic databases

eggNOGi COG3772.
HOGENOMi HOG000277067.
KOi K01185.
OMAi KDCRIRS.
OrthoDBi EOG6M6JNK.

Family and domain databases

Gene3Di 1.10.530.40. 1 hit.
InterProi IPR002196. Glyco_hydro_24.
IPR023346. Lysozyme-like_dom.
IPR023347. Lysozyme_dom.
[Graphical view ]
Pfami PF00959. Phage_lysozyme. 1 hit.
[Graphical view ]
SUPFAMi SSF53955. SSF53955. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: B / REL606Imported.

Entry informationi

Entry nameiC6UHW4_ECOBR
AccessioniPrimary (citable) accession number: C6UHW4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: October 1, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3