C6UHW4 (C6UHW4_ECOBR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Lysozyme RuleBase RU003788
EC=3.2.1.17 RuleBase RU003788

Gene names

Name:	ydfQ-2 EMBL ACT39186.1
Ordered Locus Names:	ECB_01519

Organism

Escherichia coli (strain B / REL606) [Complete proteome] [HAMAP] EMBL ACT39186.1

Taxonomic identifier

413997 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli › Escherichia coli B

Protein attributes

Sequence length	177 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. RuleBase RU003788
Sequence similarities	Belongs to the glycosyl hydrolase 24 family. RuleBase RU003788

Ontologies

Keywords
Molecular function	Antimicrobial Bacteriolytic enzyme RuleBase RU003788 Glycosidase RuleBase RU003788 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro cytolysis Inferred from electronic annotation. Source: UniProtKB-KW defense response to bacterium Inferred from electronic annotation. Source: UniProtKB-KW peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	lysozyme activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6UHW4 [UniParc]. Last modified September 22, 2009. Version 1. Checksum: D982F1F39363BCE5	FASTA	177	19,595
	10 20 30 40 50 60 MNVKIRYSLS AAVLALIAAS APAPDILDQF LDEKEGNHTT AYRDGSGIWT ICRGATMVDG 70 80 90 100 110 120 KPVIPGMKLS KEKCAQVNAI ERDKALAWVE RNIKVPLTEP QKAGIASFCP YNIGPGKCFP 130 140 150 160 170 STFYKRLNAG DRKGACEAIR WWIKDGGRDC RIRSNNCYGQ VIRRDQESAL TCWGIEQ

References

[1]

"Genome sequences of Escherichia coli B strains REL606 and BL21(DE3)." Jeong H., Barbe V., Lee C.H., Vallenet D., Yu D.S., Choi S.H., Couloux A., Lee S.W., Yoon S.H., Cattolico L., Hur C.G., Park H.S., Segurens B., Kim S.C., Oh T.K., Lenski R.E., Studier F.W., Daegelen P., Kim J.F. J. Mol. Biol. 394:644-652(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: B / REL606.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000819 Genomic DNA. Translation: ACT39186.1.
RefSeq	YP_003044722.1. NC_012967.1.
3D structure databases
ProteinModelPortal	C6UHW4.
ModBase	Search...
Protein-protein interaction databases
STRING	413997.ECB_01519.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACT39186; ACT39186; ECB_01519.
GeneID	8179045.
KEGG	ebr:ECB_01519.
PATRIC	18235127. VBIEscCol118196_1595.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3772.
HOGENOM	HOG000277067.
KO	K01185.
OMA	CRIRSND.
ProtClustDB	CLSK879915.
Family and domain databases
Gene3D	1.10.530.40. 1 hit.
InterPro	IPR002196. Glyco_hydro_24. IPR023346. Lysozyme-like_dom. IPR023347. Lysozyme_dom. [Graphical view]
Pfam	PF00959. Phage_lysozyme. 1 hit. [Graphical view]
SUPFAM	SSF53955. SSF53955. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C6UHW4_ECOBR

Accession

Primary (citable) accession number: C6UHW4

Entry history

Integrated into UniProtKB/TrEMBL:	September 22, 2009
Last sequence update:	September 22, 2009
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)