Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Lysozyme

Gene

ydfQ-2

Organism
Escherichia coli (strain B / REL606)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins.UniRule annotation

GO - Molecular functioni

  1. lysozyme activity Source: UniProtKB-EC

GO - Biological processi

  1. cell wall macromolecule catabolic process Source: InterPro
  2. cytolysis Source: UniProtKB-KW
  3. defense response to bacterium Source: UniProtKB-KW
  4. peptidoglycan catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Antimicrobial, Bacteriolytic enzymeUniRule annotation, GlycosidaseUniRule annotation, Hydrolase

Names & Taxonomyi

Protein namesi
Recommended name:
LysozymeUniRule annotation (EC:3.2.1.17UniRule annotation)
Gene namesi
Name:ydfQ-2Imported
Ordered Locus Names:ECB_01519Imported
OrganismiEscherichia coli (strain B / REL606)Imported
Taxonomic identifieri413997 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000001632: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi413997.ECB_01519.

Structurei

3D structure databases

ProteinModelPortaliC6UHW4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 24 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG3772.
HOGENOMiHOG000277067.
KOiK01185.
OMAiNDSAHEG.
OrthoDBiEOG6M6JNK.

Family and domain databases

Gene3Di1.10.530.40. 1 hit.
InterProiIPR002196. Glyco_hydro_24.
IPR023346. Lysozyme-like_dom.
IPR023347. Lysozyme_dom.
[Graphical view]
PfamiPF00959. Phage_lysozyme. 1 hit.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.

Sequencei

Sequence statusi: Complete.

C6UHW4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNVKIRYSLS AAVLALIAAS APAPDILDQF LDEKEGNHTT AYRDGSGIWT
60 70 80 90 100
ICRGATMVDG KPVIPGMKLS KEKCAQVNAI ERDKALAWVE RNIKVPLTEP
110 120 130 140 150
QKAGIASFCP YNIGPGKCFP STFYKRLNAG DRKGACEAIR WWIKDGGRDC
160 170
RIRSNNCYGQ VIRRDQESAL TCWGIEQ
Length:177
Mass (Da):19,595
Last modified:September 22, 2009 - v1
Checksum:iD982F1F39363BCE5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000819 Genomic DNA. Translation: ACT39186.1.
RefSeqiYP_003044722.1. NC_012967.1.

Genome annotation databases

EnsemblBacteriaiACT39186; ACT39186; ECB_01519.
GeneIDi8179045.
KEGGiebr:ECB_01519.
PATRICi18235127. VBIEscCol118196_1595.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000819 Genomic DNA. Translation: ACT39186.1.
RefSeqiYP_003044722.1. NC_012967.1.

3D structure databases

ProteinModelPortaliC6UHW4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi413997.ECB_01519.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACT39186; ACT39186; ECB_01519.
GeneIDi8179045.
KEGGiebr:ECB_01519.
PATRICi18235127. VBIEscCol118196_1595.

Phylogenomic databases

eggNOGiCOG3772.
HOGENOMiHOG000277067.
KOiK01185.
OMAiNDSAHEG.
OrthoDBiEOG6M6JNK.

Family and domain databases

Gene3Di1.10.530.40. 1 hit.
InterProiIPR002196. Glyco_hydro_24.
IPR023346. Lysozyme-like_dom.
IPR023347. Lysozyme_dom.
[Graphical view]
PfamiPF00959. Phage_lysozyme. 1 hit.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: B / REL606Imported.

Entry informationi

Entry nameiC6UHW4_ECOBR
AccessioniPrimary (citable) accession number: C6UHW4
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: January 7, 2015
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.