C6UGS0 (C6UGS0_ECOBR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Dipeptide transporter EMBL ACT41038.1

Gene names

Name:	dppC EMBL ACT41038.1
Ordered Locus Names:	ECB_03393

Organism

Escherichia coli (strain B / REL606) [Complete proteome] [HAMAP] EMBL ACT41038.1

Taxonomic identifier

413997 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli › Escherichia coli B

Protein attributes

Sequence length	300 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Membrane; Multi-pass membrane protein By similarity RuleBase RU000478.
Sequence similarities	Belongs to the binding-protein-dependent transport system permease family. RuleBase RU000478 Contains 1 ABC transmembrane type-1 domain. SAAS SAAS000515

Ontologies

Keywords
Biological process	Transport RuleBase RU000478 SAAS SAAS000515
Cellular component	Cell membrane SAAS SAAS000515 Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS000515
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6UGS0 [UniParc]. Last modified September 22, 2009. Version 1. Checksum: C4DD7BD82286EE62	FASTA	300	32,308
	10 20 30 40 50 60 MSQVTENKVI SAPVPMTPLQ EFWHYFKRNK GAVVGLVYVV IVLFIAIFAN WIAPYNPAEQ 70 80 90 100 110 120 FRDALLAPPA WQEGGSMAHL LGTDDVGRDV LSRLMYGARL SLLVGCLVVV LSLIMGVILG 130 140 150 160 170 180 LIAGYFGGLV DNIIMRVVDI MLALPSLLLA LVLVAIFGPS IGNAALALTF VALPHYVRLT 190 200 210 220 230 240 RAAVLVEVNR DYVTASRVAG AGAMRQMFIN IFPNCLAPLI VQASLGFSNA ILDMAALGFL 250 260 270 280 290 300 GMGAQPPTPE WGTMLSDVLQ FAQSAWWVVT FPGLAILLTV LAFNLMGDGL RDALDPKLKQ

References

[1]

"Genome sequences of Escherichia coli B strains REL606 and BL21(DE3)." Jeong H., Barbe V., Lee C.H., Vallenet D., Yu D.S., Choi S.H., Couloux A., Lee S.W., Yoon S.H., Cattolico L., Hur C.G., Park H.S., Segurens B., Kim S.C., Oh T.K., Lenski R.E., Studier F.W., Daegelen P., Kim J.F. J. Mol. Biol. 394:644-652(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: B / REL606.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000819 Genomic DNA. Translation: ACT41038.1.
RefSeq	YP_003046574.1. NC_012967.1.
3D structure databases
ProteinModelPortal	C6UGS0.
ModBase	Search...
Protein-protein interaction databases
STRING	413997.ECB_03393. C6UGS0.
Proteomic databases
PRIDE	C6UGS0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACT41038; ACT41038; ECB_03393.
GeneID	8177615.
KEGG	ebr:ECB_03393.
PATRIC	18239144. VBIEscCol118196_3561.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1173.
HOGENOM	HOG000171368.
KO	K12370.
OMA	NPADQFR.
ProtClustDB	PRK10913.
Family and domain databases
InterPro	IPR000515. BPD_transp. IPR025966. OppC_N. [Graphical view]
Pfam	PF00528. BPD_transp_1. 1 hit. PF12911. OppC_N. 1 hit. [Graphical view]
PROSITE	PS50928. ABC_TM1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C6UGS0_ECOBR

Accession

Primary (citable) accession number: C6UGS0

Entry history

Integrated into UniProtKB/TrEMBL:	September 22, 2009
Last sequence update:	September 22, 2009
Last modified:	May 1, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)