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C6UC17 (C6UC17_ECOBR) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.6.1.19 EMBL ACT40171.1
Gene names
Name:gabT EMBL ACT40171.1
Ordered Locus Names:ECB_02518 EMBL ACT40171.1
OrganismEscherichia coli (strain B / REL606) [Complete proteome] [HAMAP] EMBL ACT40171.1
Taxonomic identifier413997 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length426 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
C6UC17 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: 302C7C127328D670

FASTA42645,589
        10         20         30         40         50         60 
MSSNKELMQR RSQAIPRGVG QIHPIFADRA ENCRVWDVEG REYLDFAGGI AVLNTGHLHP 

        70         80         90        100        110        120 
KVVAAVEAQL KKLSHTCFQV LAYEPYLELC EIMNQKVPGD FAKKTLLVTT GSEAVENAVK 

       130        140        150        160        170        180 
IARAATKRSG TIAFSGAYHG RTHYTLALTG KVNPYSAGMG LMPGHVYRAL YPCPLHGISE 

       190        200        210        220        230        240 
DDAIASIHRI FKNDAAPEDI AAIVIEPVQG EGGFYAASPA FMQRLRALCD EHGIMLIADE 

       250        260        270        280        290        300 
VQSGAGRTGT LFAMEQMGVA PDLTTFAKSI AGGFPLAGVT GRAEVMDAVA PGGLGGTYAG 

       310        320        330        340        350        360 
NPIACVAALE VLKVFEQENL LQKANDLGQK LKDGLLAIAE KHPEIGDVRG LGAMIAIELF 

       370        380        390        400        410        420 
EDGDHSKPDA KLTAGIVARA RDKGLILLSC GPYYNVLRIL VPLTIEDAQI RQGLEIISQC 


FAEAKQ 

« Hide

References

[1]"Genome sequences of Escherichia coli B strains REL606 and BL21(DE3)."
Jeong H., Barbe V., Lee C.H., Vallenet D., Yu D.S., Choi S.H., Couloux A., Lee S.W., Yoon S.H., Cattolico L., Hur C.G., Park H.S., Segurens B., Kim S.C., Oh T.K., Lenski R.E., Studier F.W., Daegelen P., Kim J.F.
J. Mol. Biol. 394:644-652(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: B / REL606.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000819 Genomic DNA. Translation: ACT40171.1.
RefSeqYP_003045707.1. NC_012967.1.

3D structure databases

ProteinModelPortalC6UC17.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING413997.ECB_02518.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT40171; ACT40171; ECB_02518.
GeneID8176947.
KEGGebr:ECB_02518.
PATRIC18237258. VBIEscCol118196_2638.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0160.
HOGENOMHOG000020206.
KOK07250.
OMANLCAEAN.
OrthoDBEOG6QVRHN.
ProtClustDBPRK08088.

Enzyme and pathway databases

BioCycECOL413997:GCQD-2735-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 2 hits.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6UC17_ECOBR
AccessionPrimary (citable) accession number: C6UC17
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: December 11, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)