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C6TF12

- C6TF12_SOYBN

UniProt

C6TF12 - C6TF12_SOYBN

Protein

Glutamate decarboxylase

Gene
N/A
Organism
Glycine max (Soybean) (Glycine hispida)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    OrganismiGlycine max (Soybean) (Glycine hispida)
    Taxonomic identifieri3847 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
    ProteomesiUP000008827: Chromosome 5

    Subcellular locationi

    GO - Cellular componenti

    1. cytosol Source: EnsemblPlants/Gramene
    2. nucleus Source: EnsemblPlants/Gramene

    Structurei

    3D structure databases

    ProteinModelPortaliC6TF12.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C6TF12-1 [UniParc]FASTAAdd to Basket

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    MVFPKPSSES DLFLYSNFAS RYARDSLPRF SMPENSMPKE AAYQNIHDEL    50
    QLDAIPKLNL ASFVTTSMEE ECNKLIMESI NKNYVDMDEY PATTDLHNRC 100
    VNMIARMFHA EIGENENAIG AGTVGSSEAI MLAGLAFKKK WQNKRKAEGK 150
    PYDKPNLVTG SNVQVCWEKF ARYFEVELRE VEVREGYYVM DPVKAVELVD 200
    ENTICVAAIL GSTYNGEFED VKLLNDQLLE KNKQTGWDTP IHVDAASGGF 250
    IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RTKDDLPEDL 300
    VFHINYLGAD QPTFTLNFSK GSSQIIAQYY QLIRLGHEGY RSIMENCRDN 350
    AMVLKESLEK SGHFNILSKD NGVPVVAFSL KDRSRYDEFK ISEMLRRHGW 400
    IVPAYPMPPA AQHINVLRVV VRAEFSRTLA ERLVFDIYNV LHELEKLHPP 450
    KVTKNTKEEN KAMVENGVKN TALDAHREII AQESNKRQKI MAA 493
    Length:493
    Mass (Da):56,207
    Last modified:September 22, 2009 - v1
    Checksum:iFEEBBF4361583924
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BT096189 mRNA. Translation: ACU20414.1.
    RefSeqiNP_001241161.1. NM_001254232.2.
    UniGeneiGma.53739.

    Genome annotation databases

    EnsemblPlantsiGLYMA05G26660.1; GLYMA05G26660.1; GLYMA05G26660.
    GeneIDi100812201.
    KEGGigmx:100812201.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BT096189 mRNA. Translation: ACU20414.1 .
    RefSeqi NP_001241161.1. NM_001254232.2.
    UniGenei Gma.53739.

    3D structure databases

    ProteinModelPortali C6TF12.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi GLYMA05G26660.1 ; GLYMA05G26660.1 ; GLYMA05G26660 .
    GeneIDi 100812201.
    KEGGi gmx:100812201.

    Phylogenomic databases

    KOi K01580.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cheung F., Xiao Y., Chan A., Moskal W., Town C.D.
      Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Williams 82Imported.
    3. EnsemblPlants
      Submitted (MAY-2013) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Williams 82Imported.

    Entry informationi

    Entry nameiC6TF12_SOYBN
    AccessioniPrimary (citable) accession number: C6TF12
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3