C6TF12 (C6TF12_SOYBN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Uncharacterized protein EnsemblPlants GLYMA05G26660.1
Organism	Glycine max (Soybean) (Glycine hispida) [Reference proteome] EMBL ACU20414.1
Taxonomic identifier	3847 [NCBI]
Taxonomic lineage	cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Fabales › Fabaceae › Papilionoideae › Phaseoleae › Glycine

Protein attributes

Sequence length	493 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6TF12 [UniParc]. Last modified September 22, 2009. Version 1. Checksum: FEEBBF4361583924	FASTA	493	56,207
	10 20 30 40 50 60 MVFPKPSSES DLFLYSNFAS RYARDSLPRF SMPENSMPKE AAYQNIHDEL QLDAIPKLNL 70 80 90 100 110 120 ASFVTTSMEE ECNKLIMESI NKNYVDMDEY PATTDLHNRC VNMIARMFHA EIGENENAIG 130 140 150 160 170 180 AGTVGSSEAI MLAGLAFKKK WQNKRKAEGK PYDKPNLVTG SNVQVCWEKF ARYFEVELRE 190 200 210 220 230 240 VEVREGYYVM DPVKAVELVD ENTICVAAIL GSTYNGEFED VKLLNDQLLE KNKQTGWDTP 250 260 270 280 290 300 IHVDAASGGF IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RTKDDLPEDL 310 320 330 340 350 360 VFHINYLGAD QPTFTLNFSK GSSQIIAQYY QLIRLGHEGY RSIMENCRDN AMVLKESLEK 370 380 390 400 410 420 SGHFNILSKD NGVPVVAFSL KDRSRYDEFK ISEMLRRHGW IVPAYPMPPA AQHINVLRVV 430 440 450 460 470 480 VRAEFSRTLA ERLVFDIYNV LHELEKLHPP KVTKNTKEEN KAMVENGVKN TALDAHREII 490 AQESNKRQKI MAA

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	Cheung F., Xiao Y., Chan A., Moskal W., Town C.D. Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Genome sequence of the palaeopolyploid soybean." Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D., Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D. , Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K., Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.C., Jackson S.A. Nature 463:178-183(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Williams 82 EnsemblPlants GLYMA05G26660.1.
[3]	EnsemblPlants Submitted (NOV-2012) to UniProtKB Cited for: IDENTIFICATION. Strain: Williams 82 EnsemblPlants GLYMA05G26660.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BT096189 mRNA. Translation: ACU20414.1.
RefSeq	NP_001241161.1. NM_001254232.2.
UniGene	Gma.53739.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	GLYMA05G26660.1; GLYMA05G26660.1; GLYMA05G26660.
GeneID	100812201.
KEGG	gmx:100812201.
Phylogenomic databases
KO	K01580.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C6TF12_SOYBN

Accession

Primary (citable) accession number: C6TF12

Entry history

Integrated into UniProtKB/TrEMBL:	September 22, 2009
Last sequence update:	September 22, 2009
Last modified:	April 3, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)