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C6TF12

- C6TF12_SOYBN

UniProt

C6TF12 - C6TF12_SOYBN

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Protein

Glutamate decarboxylase

Gene
N/A
Organism
Glycine max (Soybean) (Glycine hispida)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
OrganismiGlycine max (Soybean) (Glycine hispida)
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
ProteomesiUP000008827: Chromosome 5

Structurei

3D structure databases

ProteinModelPortaliC6TF12.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

InParanoidiC6TF12.
KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

C6TF12-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVFPKPSSES DLFLYSNFAS RYARDSLPRF SMPENSMPKE AAYQNIHDEL
60 70 80 90 100
QLDAIPKLNL ASFVTTSMEE ECNKLIMESI NKNYVDMDEY PATTDLHNRC
110 120 130 140 150
VNMIARMFHA EIGENENAIG AGTVGSSEAI MLAGLAFKKK WQNKRKAEGK
160 170 180 190 200
PYDKPNLVTG SNVQVCWEKF ARYFEVELRE VEVREGYYVM DPVKAVELVD
210 220 230 240 250
ENTICVAAIL GSTYNGEFED VKLLNDQLLE KNKQTGWDTP IHVDAASGGF
260 270 280 290 300
IAPFLYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVIW RTKDDLPEDL
310 320 330 340 350
VFHINYLGAD QPTFTLNFSK GSSQIIAQYY QLIRLGHEGY RSIMENCRDN
360 370 380 390 400
AMVLKESLEK SGHFNILSKD NGVPVVAFSL KDRSRYDEFK ISEMLRRHGW
410 420 430 440 450
IVPAYPMPPA AQHINVLRVV VRAEFSRTLA ERLVFDIYNV LHELEKLHPP
460 470 480 490
KVTKNTKEEN KAMVENGVKN TALDAHREII AQESNKRQKI MAA
Length:493
Mass (Da):56,207
Last modified:September 22, 2009 - v1
Checksum:iFEEBBF4361583924
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BT096189 mRNA. Translation: ACU20414.1.
RefSeqiNP_001241161.1. NM_001254232.2.
UniGeneiGma.53739.

Genome annotation databases

EnsemblPlantsiGLYMA05G26660.1; GLYMA05G26660.1; GLYMA05G26660.
GeneIDi100812201.
KEGGigmx:100812201.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BT096189 mRNA. Translation: ACU20414.1 .
RefSeqi NP_001241161.1. NM_001254232.2.
UniGenei Gma.53739.

3D structure databases

ProteinModelPortali C6TF12.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi GLYMA05G26660.1 ; GLYMA05G26660.1 ; GLYMA05G26660 .
GeneIDi 100812201.
KEGGi gmx:100812201.

Phylogenomic databases

InParanoidi C6TF12.
KOi K01580.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cheung F., Xiao Y., Chan A., Moskal W., Town C.D.
    Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Williams 82Imported.
  3. EnsemblPlants
    Submitted (MAY-2013) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Williams 82Imported.

Entry informationi

Entry nameiC6TF12_SOYBN
AccessioniPrimary (citable) accession number: C6TF12
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: October 29, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3