Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

C6TEX2

- C6TEX2_SOYBN

UniProt

C6TEX2 - C6TEX2_SOYBN

Protein
Submitted name:

Putative uncharacterized protein

Gene
N/A
Organism
Glycine max (Soybean) (Glycine hispida)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Cofactori

    Binds at least 14 chlorophylls (8 Chl-a and 6 Chl-b) and carotenoids such as lutein and neoxanthin.SAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei109 – 1091Chlorophylla 6 (covalent)Imported
    Binding sitei129 – 1291Chlorophylla 10 (covalent)Imported

    GO - Molecular functioni

    1. chlorophyll binding Source: UniProtKB-KW

    GO - Biological processi

    1. photosynthesis, light harvesting Source: InterPro
    2. protein-chromophore linkage Source: UniProtKB-KW

    Keywords - Biological processi

    Photosynthesis

    Keywords - Ligandi

    ChlorophyllSAAS annotation, Chromophore, MagnesiumSAAS annotation, Metal-bindingSAAS annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    OrganismiGlycine max (Soybean) (Glycine hispida)Imported
    Taxonomic identifieri3847 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja

    Subcellular locationi

    GO - Cellular componenti

    1. chloroplast Source: UniProtKB-KW
    2. integral component of membrane Source: UniProtKB-KW
    3. photosystem II Source: UniProtKB-KW

    Keywords - Cellular componenti

    ChloroplastSAAS annotation, Membrane, Photosystem ISAAS annotation, Photosystem IISAAS annotation, Plastid, ThylakoidSAAS annotation

    PTM / Processingi

    Keywords - PTMi

    PhosphoproteinSAAS annotation

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2WSCX-ray3.3031-276[»]
    2WSEX-ray3.4931-276[»]
    2WSFX-ray3.4831-276[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    TransmembraneSAAS annotation

    Phylogenomic databases

    KOiK08909.

    Family and domain databases

    Gene3Di1.10.3460.10. 1 hit.
    InterProiIPR001344. Chloro_AB-bd_pln.
    IPR022796. Chloroa_b-bind.
    IPR023329. Chlorophyll_a/b-bd_dom.
    [Graphical view]
    PANTHERiPTHR21649. PTHR21649. 1 hit.
    PfamiPF00504. Chloroa_b-bind. 1 hit.
    [Graphical view]
    SUPFAMiSSF103511. SSF103511. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C6TEX2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAAQALVSSS SLTFSAEAAR QSLGPRSLQS PFGFSRKASF LVKAAATPPV    50
    KQGSDRPLWF ASKQSLSYLD GSLPGDYGFD PLGLSDPEGT GGFIEPKWLA 100
    YGEIINGRYA MLGAVGAIAP EILGKAGLIP QETALPWFRT GVFPPAGTYN 150
    YWADSYTLFV FEMALMGFAE HRRFQDWAKP GSMGKQYFLG LEKGLGGSGE 200
    PAYPGGPFFN PLGFGKDEKS LKDLKLKEVK NGRLAMLAIL GYFVQALVTG 250
    VGPYQNLLDH LTDPVHNNIL TSLKFH 276
    Length:276
    Mass (Da):29,809
    Last modified:September 22, 2009 - v1
    Checksum:iE1DCAA4FC59B01CB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BT096149 mRNA. Translation: ACU20374.1.
    RefSeqiNP_001276264.1. NM_001289335.1.
    UniGeneiGma.31787.

    Genome annotation databases

    GeneIDi100808379.
    KEGGigmx:100808379.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BT096149 mRNA. Translation: ACU20374.1 .
    RefSeqi NP_001276264.1. NM_001289335.1.
    UniGenei Gma.31787.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2WSC X-ray 3.30 3 1-276 [» ]
    2WSE X-ray 3.49 3 1-276 [» ]
    2WSF X-ray 3.48 3 1-276 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 100808379.
    KEGGi gmx:100808379.

    Phylogenomic databases

    KOi K08909.

    Family and domain databases

    Gene3Di 1.10.3460.10. 1 hit.
    InterProi IPR001344. Chloro_AB-bd_pln.
    IPR022796. Chloroa_b-bind.
    IPR023329. Chlorophyll_a/b-bd_dom.
    [Graphical view ]
    PANTHERi PTHR21649. PTHR21649. 1 hit.
    Pfami PF00504. Chloroa_b-bind. 1 hit.
    [Graphical view ]
    SUPFAMi SSF103511. SSF103511. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cheung F., Xiao Y., Chan A., Moskal W., Town C.D.
      Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    2. "Structure determination and improved model of plant photosystem I."
      Amunts A., Toporik H., Borovikova A., Nelson N.
      J. Biol. Chem. 285:3478-3486(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.30 ANGSTROMS) IN COMPLEX WITH CHLOROPHYLLA.

    Entry informationi

    Entry nameiC6TEX2_SOYBN
    AccessioniPrimary (citable) accession number: C6TEX2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3