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Protein

Chlorophyll a-b binding protein, chloroplastic

Gene
N/A
Organism
Glycine max (Soybean) (Glycine hispida)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei109Chlorophyll a 6 (covalent)Combined sources1
Binding sitei129Chlorophyll a 10 (covalent)Combined sources1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processPhotosynthesis
LigandChlorophyllUniRule annotationSAAS annotation, Chromophore

Names & Taxonomyi

Protein namesi
Recommended name:
Chlorophyll a-b binding protein, chloroplasticUniRule annotation
OrganismiGlycine max (Soybean) (Glycine hispida)Imported
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

ChloroplastUniRule annotationSAAS annotation, Membrane, Photosystem IUniRule annotation, Photosystem IIUniRule annotation, Plastid, ThylakoidUniRule annotationSAAS annotation

PTM / Processingi

Proteomic databases

PRIDEiC6TEX2

Expressioni

Gene expression databases

ExpressionAtlasiC6TEX2 baseline and differential

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2WSCX-ray3.3031-276[»]
2WSEX-ray3.4931-276[»]
2WSFX-ray3.4831-276[»]
SMRiC6TEX2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

eggNOGiENOG410IHHS Eukaryota
ENOG410ZM8E LUCA
KOiK08909

Family and domain databases

Gene3Di1.10.3460.101 hit
InterProiView protein in InterPro
IPR001344 Chloro_AB-bd_pln
IPR022796 Chloroa_b-bind
IPR023329 Chlorophyll_a/b-bd_dom_sf
PANTHERiPTHR21649 PTHR21649, 1 hit
PfamiView protein in Pfam
PF00504 Chloroa_b-bind, 1 hit

Sequencei

Sequence statusi: Complete.

C6TEX2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAQALVSSS SLTFSAEAAR QSLGPRSLQS PFGFSRKASF LVKAAATPPV
60 70 80 90 100
KQGSDRPLWF ASKQSLSYLD GSLPGDYGFD PLGLSDPEGT GGFIEPKWLA
110 120 130 140 150
YGEIINGRYA MLGAVGAIAP EILGKAGLIP QETALPWFRT GVFPPAGTYN
160 170 180 190 200
YWADSYTLFV FEMALMGFAE HRRFQDWAKP GSMGKQYFLG LEKGLGGSGE
210 220 230 240 250
PAYPGGPFFN PLGFGKDEKS LKDLKLKEVK NGRLAMLAIL GYFVQALVTG
260 270
VGPYQNLLDH LTDPVHNNIL TSLKFH
Length:276
Mass (Da):29,809
Last modified:September 22, 2009 - v1
Checksum:iE1DCAA4FC59B01CB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT096149 mRNA Translation: ACU20374.1
RefSeqiNP_001276264.1, NM_001289335.1
UniGeneiGma.31787

Genome annotation databases

GeneIDi100808379
KEGGigmx:100808379

Similar proteinsi

Entry informationi

Entry nameiC6TEX2_SOYBN
AccessioniPrimary (citable) accession number: C6TEX2
Entry historyiIntegrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: February 28, 2018
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources