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Protein

Plastocyanin

Gene

GLYMA_06G020400

Organism
Glycine max (Soybean) (Glycine hispida)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Electron transportUniRule annotation, Transport

Keywords - Ligandi

CopperUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
PlastocyaninUniRule annotation
Gene namesi
ORF Names:GLYMA_06G020400Imported
OrganismiGlycine max (Soybean) (Glycine hispida)
Taxonomic identifieri3847 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaeGlycineSoja
Proteomesi
  • UP000008827 Componenti: Chromosome 6

Subcellular locationi

  • Plastidchloroplast thylakoid membrane UniRule annotation; Peripheral membrane protein UniRule annotation; Lumenal side UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

MembraneUniRule annotation, ThylakoidUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi3847.GLYMA06G02300.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini70 – 16798Copper-bindInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the plastocyanin family.UniRule annotation
Contains 3 plastocyanin-like domains.UniRule annotation

Phylogenomic databases

eggNOGiENOG410IY43. Eukaryota.
COG3794. LUCA.
KOiK02638.
OMAiNHEEYAN.
OrthoDBiEOG09360R7Y.

Family and domain databases

Gene3Di2.60.40.420. 1 hit.
InterProiIPR000923. BlueCu_1.
IPR028871. BlueCu_1_BS.
IPR001235. Copper_blue_Plastocyanin.
IPR008972. Cupredoxin.
IPR002387. Plastocyanin.
[Graphical view]
PfamiPF00127. Copper-bind. 1 hit.
[Graphical view]
PRINTSiPR00156. COPPERBLUE.
PR00157. PLASTOCYANIN.
SUPFAMiSSF49503. SSF49503. 1 hit.
TIGRFAMsiTIGR02656. cyanin_plasto. 1 hit.
PROSITEiPS00196. COPPER_BLUE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6SVR0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATVTSAAVS IPSFTGLKAS AGKVSAAAVK VSAPQATRFC GIKASLKDVG
60 70 80 90 100
VAVVATAASA VLASNAMAIE VLLGTDDGSL VFSPNSFSVA PGEKIVFKNN
110 120 130 140 150
AGFPHNVVFD EDEIPSGVDA GKISMSEEDL LNAAGETYSV TLDAKGTYSF
160
YCSPHQGAGM VGKVTVN
Length:167
Mass (Da):16,836
Last modified:September 22, 2009 - v1
Checksum:i2106CDB1661C44CC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT089253 mRNA. Translation: ACU13333.1.
CM000839 Genomic DNA. Translation: KRH51646.1.
RefSeqiNP_001238695.1. NM_001251766.2.
UniGeneiGma.55130.

Genome annotation databases

EnsemblPlantsiGLYMA06G02300.1; GLYMA06G02300.1; GLYMA06G02300.
GeneIDi100499708.
GrameneiGLYMA06G02300.1; GLYMA06G02300.1; GLYMA06G02300.
KEGGigmx:100499708.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BT089253 mRNA. Translation: ACU13333.1.
CM000839 Genomic DNA. Translation: KRH51646.1.
RefSeqiNP_001238695.1. NM_001251766.2.
UniGeneiGma.55130.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3847.GLYMA06G02300.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiGLYMA06G02300.1; GLYMA06G02300.1; GLYMA06G02300.
GeneIDi100499708.
GrameneiGLYMA06G02300.1; GLYMA06G02300.1; GLYMA06G02300.
KEGGigmx:100499708.

Phylogenomic databases

eggNOGiENOG410IY43. Eukaryota.
COG3794. LUCA.
KOiK02638.
OMAiNHEEYAN.
OrthoDBiEOG09360R7Y.

Family and domain databases

Gene3Di2.60.40.420. 1 hit.
InterProiIPR000923. BlueCu_1.
IPR028871. BlueCu_1_BS.
IPR001235. Copper_blue_Plastocyanin.
IPR008972. Cupredoxin.
IPR002387. Plastocyanin.
[Graphical view]
PfamiPF00127. Copper-bind. 1 hit.
[Graphical view]
PRINTSiPR00156. COPPERBLUE.
PR00157. PLASTOCYANIN.
SUPFAMiSSF49503. SSF49503. 1 hit.
TIGRFAMsiTIGR02656. cyanin_plasto. 1 hit.
PROSITEiPS00196. COPPER_BLUE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiC6SVR0_SOYBN
AccessioniPrimary (citable) accession number: C6SVR0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: September 7, 2016
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.