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C6SRH2 (C6SRH2_STRMN) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118
Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118 EMBL BAH88314.1
Ordered Locus Names:SmuNN2025_1288 EMBL BAH88314.1
OrganismStreptococcus mutans serotype c (strain NN2025) [Complete proteome] [HAMAP] EMBL BAH88314.1
Taxonomic identifier511691 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Lactobacillales › Streptococcaceae › Streptococcus ›

Protein attributes

Sequence length398 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding84 – 885GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding139 – 1424GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
C6SRH2 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: 660548E674C6DF9D

FASTA39843,919
        10         20         30         40         50         60 
MAKEKYDRSK PHVNIGTIGH VDHGKTTLTA AITTVLARRL PSAVNQPKDY SSIDAAPEER 

        70         80         90        100        110        120 
ERGITINTAH VEYETEKRHY AHIDAPGHAD YVKNMITGAA QMDGAILVVA STDGPMPQTR 

       130        140        150        160        170        180 
EHILLSRQVG VKYLIVFMNK VDLVDDEELL ELVEMEIRDL LSEYDFPGDD IPVIQGSALK 

       190        200        210        220        230        240 
ALEGDTAQED IIMELMHTVD DYIPDPERDT DKPLLLPVED VFSITGRGTV ASGRIDRGTV 

       250        260        270        280        290        300 
KVNDEVEIVG IRDDIQKAVV TGVEMFRKQL DEGIAGDNVG VLLRGIQRDE IERGQVLAKP 

       310        320        330        340        350        360 
GSIHPHTKFK GEVYILTKEE GGRHTPFFNN YRPQFYFRTT DVTGSIELPA GTEMVMPGDN 

       370        380        390 
VTIDVELIHP IAVEQGTTFS IREGGRTVGS GIVSEIEA

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References

[1]"Comparative genomic analyses of Streptococcus mutans provide insights into chromosomal shuffling and species-specific content."
Maruyama F., Kobata M., Kurokawa K., Nishida K., Sakurai A., Nakano K., Nomura R., Kawabata S., Ooshima T., Nakai K., Hattori M., Hamada S., Nakagawa I.
BMC Genomics 10:358-358(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NN2025 EMBL BAH88314.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP010655 Genomic DNA. Translation: BAH88314.1.
RefSeqYP_003485206.1. NC_013928.1.

3D structure databases

ProteinModelPortalC6SRH2.
SMRC6SRH2. Positions 2-396.
ModBaseSearch...

Proteomic databases

PRIDEC6SRH2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAH88314; BAH88314; SmuNN2025_1288.
GeneID8835017.
KEGGsmc:SmuNN2025_1288.
PATRIC35314472. VBIStrMut11111_1288.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000229290.
KOK02358.
OMACEFVGYN.
ProtClustDBPRK12736.

Enzyme and pathway databases

BioCycSMUT511691:GH9C-1956-MONOMER.

Family and domain databases

HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR005225. Small_GTP-bd_dom.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
IPR009000. Transl_elong_init/rib_B-barrel.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50465. Elong_init_C. 1 hit.
SSF50447. Translat_factor. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6SRH2_STRMN
AccessionPrimary (citable) accession number: C6SRH2
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: May 1, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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