Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

ATP-dependent RNA helicase DBP4, putative

Gene

PF14_0183b

Organism
Plasmodium falciparum (isolate 3D7)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  • ATP binding Source: UniProtKB-KW
  • ATP-dependent RNA helicase activity Source: GeneDB
  • RNA binding Source: UniProtKB-KW

GO - Biological processi

Keywordsi

Molecular functionHelicaseSAAS annotationImported, Hydrolase, RNA-bindingSAAS annotation
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent RNA helicase DBP4, putativeImported (EC:3.6.4.13Imported)
Submitted name:
RNA helicase, putativeImported
Gene namesi
ORF Names:PF14_0183bImported, PF3D7_1418900Imported
OrganismiPlasmodium falciparum (isolate 3D7)Imported
Taxonomic identifieri36329 [NCBI]
Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiidaePlasmodiumPlasmodium (Laverania)
Proteomesi
  • UP000001450 Componenti: Chromosome 14

Organism-specific databases

EuPathDBiPlasmoDB:PF3D7_1418900.

Subcellular locationi

GO - Cellular componenti

Structurei

3D structure databases

SMRiC6S3H8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini123 – 151Q_MOTIFInterPro annotationAdd BLAST29
Domaini154 – 330Helicase ATP-bindingInterPro annotationAdd BLAST177
Domaini357 – 510Helicase C-terminalInterPro annotationAdd BLAST154

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili23 – 50Sequence analysisAdd BLAST28
Coiled coili57 – 77Sequence analysisAdd BLAST21
Coiled coili597 – 626Sequence analysisAdd BLAST30
Coiled coili776 – 796Sequence analysisAdd BLAST21

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi123 – 151Q motifPROSITE-ProRule annotationAdd BLAST29

Sequence similaritiesi

Belongs to the DEAD box helicase family.SAAS annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

InParanoidiC6S3H8.
OMAiLRDPEYI.

Family and domain databases

CDDicd00079. HELICc. 1 hit.
InterProiView protein in InterPro
IPR011545. DEAD/DEAH_box_helicase_dom.
IPR025313. DUF4217.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR014014. RNA_helicase_DEAD_Q_motif.
PfamiView protein in Pfam
PF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM01178. DUF4217. 1 hit.
SM00490. HELICc. 1 hit.
SUPFAMiSSF52540. SSF52540. 4 hits.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51195. Q_MOTIF. 1 hit.

Sequencei

Sequence statusi: Complete.

C6S3H8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MINNKGNVGK GKRIFNKNYG SISKKKKKRN DKLKKDVSNN KDERLELQKR
60 70 80 90 100
IDETLGLIVE ENKRKQYEEK INNDLEKNEN VKNFLKSDKT NNNTYDEDEL
110 120 130 140 150
KNNKNKKYKN NLTIIDKNVL TSAEFKTLPI SKRTLRALNE NNFIYMTNIQ
160 170 180 190 200
YVSLPIVLLN KHIYAQAQTG TGKTLCFCIP LIEKMYRNSI DNYNKILGGI
210 220 230 240 250
IITPTRELVF QIFEVLNMLN KYHKLNICCA IGGKNEEKEK SIFSYANIIV
260 270 280 290 300
CTTGRLLYHL ENNYYCNLDY LSTLIIDEID KLIDKSFYDN LKNILLYKPK
310 320 330 340 350
ENCQICLFSA TICKFLNVIL NTFHIKDYEY VSINDNDKYI ESNNVKQIYI
360 370 380 390 400
ECDIYEKINY LYTFLFSKKN KKIIVFFSTC KQVRFMYEVF KKIKVGVMKF
410 420 430 440 450
LQLHGKLKQT SRLNTYHFFS KKKNFVCLFT TDIACRGLDF SSIDWVIHFD
460 470 480 490 500
FPDNIETFIH RSGRTGRFTN MGNSLIFLTK QIDNKKLFLN VLKDNNIFIK
510 520 530 540 550
EKFIKKQKLF DIKNKIHSLN AAFVDIKHLA KKALIIYLRH LYIVMKFKDI
560 570 580 590 600
KKKIQLNELA YSYGLIEFSQ DMINELNIND EKEVQVKKKK SRLEKFLEIL
610 620 630 640 650
KNKKALKNKQ NHEKKEEEKY NNTQDEKEYD NDNEQGHEIY DEAHENYMCE
660 670 680 690 700
IKKKKRVKDI SHIDQSQSNE NPFIHSDIQS DQDDLFIQKR VEIKDDTPIM
710 720 730 740 750
LPTKKRKKRV KVAKTLSNSI LYDDSGNEIK DDNVKFKILV NELNQNEDHD
760 770 780 790 800
MEQDTHYDDD DDNNNNNDKY DQKTYIESLK EKIQRDNEKM KISKLRKKKD
810 820 830 840 850
FIADRKKHEE DSSSTDNTNF SDIQDKDDLE YNESSEGDNG NYNESDDFVK
860 870
NKKKISEKCD PTDDISDLEN KVMMFL
Length:876
Mass (Da):103,746
Last modified:September 22, 2009 - v1
Checksum:i13659D82AAA8A072
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014187 Genomic DNA. Translation: ACU12402.1.
LN999946 Genomic DNA. Translation: CZT99895.1.
RefSeqiXP_002585454.1. XM_002585408.1.

Genome annotation databases

EnsemblProtistsiCZT99895; CZT99895; PF3D7_1418900.
GeneDBiPF3D7_1418900.1:pep.
GeneIDi8444987.
KEGGipfa:PF14_0183b.

Similar proteinsi

Entry informationi

Entry nameiC6S3H8_PLAF7
AccessioniPrimary (citable) accession number: C6S3H8
Entry historyiIntegrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: December 20, 2017
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported