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C6L245 (C6L245_PIG) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Uncharacterized protein Ensembl ENSSSCP00000017461
Gene names
Name:try EMBL BAH86963.1
Synonyms:TRY Ensembl ENSSSCP00000017461
OrganismSus scrofa (Pig) [Reference proteome]
Taxonomic identifier9823 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus

Protein attributes

Sequence length247 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase
Protease
Serine protease RuleBase RU004260
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processproteolysis

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionserine-type endopeptidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C6L245 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: D0EA90A301324BAC

FASTA24726,178
        10         20         30         40         50         60 
MNPLLILACI GAAVAFPTDD DDKIVGGYTC AANSVPYQVS LNSGYHFCGG SLISDQWVVS 

        70         80         90        100        110        120 
AAHCYKSRIQ VRLGENNIDV LEGDEQFIDA AKIIRHPKYN SWTLDNDILL IKLSSPAVLN 

       130        140        150        160        170        180 
SRVSTLALPS ACAPAGTLCL ISGWGNTLSS GVNYPELLQC LDAPLLSQAE CEASYPGEIT 

       190        200        210        220        230        240 
SNMVCAGFLE GGKDSCQGDS GGPVACNGQL QGIVSWGYGC AQKNRPGVYT KVCNYVDWIQ 


QTIAANS 

« Hide

References

« Hide 'large scale' references
[1]"Genomic structure of the whole D-J-C clusters and the upstream region coding V segments of the TRB locus in pig."
Eguchi-Ogawa T., Toki D., Uenishi H.
Dev. Comp. Immunol. 33:1111-1119(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]Porcine genome sequencing project
Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CU655925 Genomic DNA. No translation available.
AB476299 Genomic DNA. Translation: BAH86963.1.
AB476300 Genomic DNA. Translation: BAH86994.1.
RefSeqNP_001193367.1. NM_001206438.1.
UniGeneSsc.25371.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING9823.ENSSSCP00000017461.

Protein family/group databases

MEROPSS01.120.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSSSCT00000017942; ENSSSCP00000017461; ENSSSCG00000016478.
GeneID100525899.
KEGGssc:100525899.

Organism-specific databases

CTD65223.

Phylogenomic databases

eggNOGCOG5640.
GeneTreeENSGT00740000115192.
KOK01312.
OMAHPKYSSW.
OrthoDBEOG75B84T.
TreeFamTF331065.

Family and domain databases

InterProIPR001254. Peptidase_S1.
IPR018114. Peptidase_S1_AS.
IPR001314. Peptidase_S1A.
IPR009003. Trypsin-like_Pept_dom.
[Graphical view]
PfamPF00089. Trypsin. 1 hit.
[Graphical view]
PRINTSPR00722. CHYMOTRYPSIN.
SMARTSM00020. Tryp_SPc. 1 hit.
[Graphical view]
SUPFAMSSF50494. SSF50494. 1 hit.
PROSITEPS50240. TRYPSIN_DOM. 1 hit.
PS00134. TRYPSIN_HIS. 1 hit.
PS00135. TRYPSIN_SER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6L245_PIG
AccessionPrimary (citable) accession number: C6L245
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: March 19, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)