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Protein
Submitted name:

Putative trypsinogen

Gene

try

Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protease, Serine proteaseUniRule annotation

Enzyme and pathway databases

ReactomeiREACT_322929. Activation of Matrix Metalloproteinases.
REACT_338917. Collagen degradation.
REACT_341405. Cobalamin (Cbl, vitamin B12) transport and metabolism.

Protein family/group databases

MEROPSiS01.120.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative trypsinogenImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:tryImported
Synonyms:TRYImported
OrganismiSus scrofa (Pig)
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
ProteomesiUP000008227 Componenti: Chromosome 18

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiC6L245.

Expressioni

Gene expression databases

GenevisibleiC6L245. SS.

Interactioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000017461.

Structurei

3D structure databases

ProteinModelPortaliC6L245.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the peptidase S1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG5640.
GeneTreeiENSGT00760000118862.
InParanoidiC6L245.
KOiK01312.
OMAiHPKYSSW.
OrthoDBiEOG75B84T.
TreeFamiTF331065.

Family and domain databases

InterProiIPR001254. Peptidase_S1.
IPR018114. Peptidase_S1_AS.
IPR001314. Peptidase_S1A.
IPR009003. Trypsin-like_Pept_dom.
[Graphical view]
PfamiPF00089. Trypsin. 1 hit.
[Graphical view]
PRINTSiPR00722. CHYMOTRYPSIN.
SMARTiSM00020. Tryp_SPc. 1 hit.
[Graphical view]
SUPFAMiSSF50494. SSF50494. 1 hit.
PROSITEiPS50240. TRYPSIN_DOM. 1 hit.
PS00134. TRYPSIN_HIS. 1 hit.
PS00135. TRYPSIN_SER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6L245-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNPLLILACI GAAVAFPTDD DDKIVGGYTC AANSVPYQVS LNSGYHFCGG
60 70 80 90 100
SLISDQWVVS AAHCYKSRIQ VRLGENNIDV LEGDEQFIDA AKIIRHPKYN
110 120 130 140 150
SWTLDNDILL IKLSSPAVLN SRVSTLALPS ACAPAGTLCL ISGWGNTLSS
160 170 180 190 200
GVNYPELLQC LDAPLLSQAE CEASYPGEIT SNMVCAGFLE GGKDSCQGDS
210 220 230 240
GGPVACNGQL QGIVSWGYGC AQKNRPGVYT KVCNYVDWIQ QTIAANS
Length:247
Mass (Da):26,178
Last modified:September 22, 2009 - v1
Checksum:iD0EA90A301324BAC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU655925 Genomic DNA. No translation available.
AB476299 Genomic DNA. Translation: BAH86963.1.
AB476300 Genomic DNA. Translation: BAH86994.1.
RefSeqiNP_001193367.1. NM_001206438.1.
UniGeneiSsc.25371.

Genome annotation databases

EnsembliENSSSCT00000017942; ENSSSCP00000017461; ENSSSCG00000016478.
GeneIDi100525899.
KEGGissc:100525899.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU655925 Genomic DNA. No translation available.
AB476299 Genomic DNA. Translation: BAH86963.1.
AB476300 Genomic DNA. Translation: BAH86994.1.
RefSeqiNP_001193367.1. NM_001206438.1.
UniGeneiSsc.25371.

3D structure databases

ProteinModelPortaliC6L245.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000017461.

Protein family/group databases

MEROPSiS01.120.

Proteomic databases

PaxDbiC6L245.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSSCT00000017942; ENSSSCP00000017461; ENSSSCG00000016478.
GeneIDi100525899.
KEGGissc:100525899.

Organism-specific databases

CTDi65223.

Phylogenomic databases

eggNOGiCOG5640.
GeneTreeiENSGT00760000118862.
InParanoidiC6L245.
KOiK01312.
OMAiHPKYSSW.
OrthoDBiEOG75B84T.
TreeFamiTF331065.

Enzyme and pathway databases

ReactomeiREACT_322929. Activation of Matrix Metalloproteinases.
REACT_338917. Collagen degradation.
REACT_341405. Cobalamin (Cbl, vitamin B12) transport and metabolism.

Gene expression databases

GenevisibleiC6L245. SS.

Family and domain databases

InterProiIPR001254. Peptidase_S1.
IPR018114. Peptidase_S1_AS.
IPR001314. Peptidase_S1A.
IPR009003. Trypsin-like_Pept_dom.
[Graphical view]
PfamiPF00089. Trypsin. 1 hit.
[Graphical view]
PRINTSiPR00722. CHYMOTRYPSIN.
SMARTiSM00020. Tryp_SPc. 1 hit.
[Graphical view]
SUPFAMiSSF50494. SSF50494. 1 hit.
PROSITEiPS50240. TRYPSIN_DOM. 1 hit.
PS00134. TRYPSIN_HIS. 1 hit.
PS00135. TRYPSIN_SER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genomic structure of the whole D-J-C clusters and the upstream region coding V segments of the TRB locus in pig."
    Eguchi-Ogawa T., Toki D., Uenishi H.
    Dev. Comp. Immunol. 33:1111-1119(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. Porcine genome sequencing project
    Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiC6L245_PIG
AccessioniPrimary (citable) accession number: C6L245
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: June 24, 2015
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.