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C6KTD2

- SET1_PLAF7

UniProt

C6KTD2 - SET1_PLAF7

Protein

Putative histone-lysine N-methyltransferase 1

Gene

SET1

Organism
Plasmodium falciparum (isolate 3D7)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    Probable histone methyltransferase.By similarity

    Catalytic activityi

    S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone].

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Zinc fingeri1671 – 172858PHD-type 1PROSITE-ProRule annotationAdd
    BLAST
    Zinc fingeri1761 – 181959PHD-type 2PROSITE-ProRule annotationAdd
    BLAST
    Zinc fingeri1764 – 181754RING-type; degenerateSequence AnalysisAdd
    BLAST
    Zinc fingeri2510 – 257970PHD-type 3PROSITE-ProRule annotationAdd
    BLAST
    Zinc fingeri5557 – 560953PHD-type 4; degeneratePROSITE-ProRule annotationAdd
    BLAST

    GO - Molecular functioni

    1. histone-lysine N-methyltransferase activity Source: UniProtKB-EC
    2. protein domain specific binding Source: GeneDB_Pfalciparum
    3. zinc ion binding Source: InterPro

    GO - Biological processi

    1. regulation of transcription, DNA-templated Source: UniProtKB-KW
    2. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Molecular functioni

    Chromatin regulator, Methyltransferase, Transferase

    Keywords - Biological processi

    Transcription, Transcription regulation

    Keywords - Ligandi

    Metal-binding, S-adenosyl-L-methionine, Zinc

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative histone-lysine N-methyltransferase 1 (EC:2.1.1.43)
    Short name:
    PfSET1
    Gene namesi
    Name:SET1
    ORF Names:PFF1440w
    OrganismiPlasmodium falciparum (isolate 3D7)
    Taxonomic identifieri36329 [NCBI]
    Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiumPlasmodium (Laverania)
    ProteomesiUP000001450: Chromosome 6

    Organism-specific databases

    EuPathDBiPlasmoDB:PF3D7_0629700.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 67536753Putative histone-lysine N-methyltransferase 1PRO_0000388753Add
    BLAST

    Proteomic databases

    PRIDEiC6KTD2.

    Expressioni

    Developmental stagei

    constitutive pattern of expression.1 Publication

    Keywords - Developmental stagei

    Merozoite

    Interactioni

    Protein-protein interaction databases

    BioGridi1210423. 12 interactions.
    STRINGi5833.PFF1440w-1.

    Structurei

    3D structure databases

    ProteinModelPortaliC6KTD2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini1832 – 190271BromoPROSITE-ProRule annotationAdd
    BLAST
    Domaini6612 – 6729118SETPROSITE-ProRule annotationAdd
    BLAST
    Domaini6737 – 675317Post-SETPROSITE-ProRule annotationAdd
    BLAST

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi66 – 63296264Asn-richSequence AnalysisAdd
    BLAST
    Compositional biasi451 – 575125Lys-richSequence AnalysisAdd
    BLAST
    Compositional biasi843 – 1091249Lys-richSequence AnalysisAdd
    BLAST
    Compositional biasi1460 – 1591132Lys-richSequence AnalysisAdd
    BLAST
    Compositional biasi4196 – 4338143Lys-richSequence AnalysisAdd
    BLAST
    Compositional biasi5401 – 5520120Lys-richSequence AnalysisAdd
    BLAST

    Sequence similaritiesi

    Belongs to the class V-like SAM-binding methyltransferase superfamily.PROSITE-ProRule annotation
    Contains 1 bromo domain.PROSITE-ProRule annotation
    Contains 4 PHD-type zinc fingers.PROSITE-ProRule annotation
    Contains 1 post-SET domain.PROSITE-ProRule annotation
    Contains 1 RING-type zinc finger.Sequence Analysis
    Contains 1 SET domain.PROSITE-ProRule annotation

    Zinc finger

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Zinc fingeri1671 – 172858PHD-type 1PROSITE-ProRule annotationAdd
    BLAST
    Zinc fingeri1761 – 181959PHD-type 2PROSITE-ProRule annotationAdd
    BLAST
    Zinc fingeri1764 – 181754RING-type; degenerateSequence AnalysisAdd
    BLAST
    Zinc fingeri2510 – 257970PHD-type 3PROSITE-ProRule annotationAdd
    BLAST
    Zinc fingeri5557 – 560953PHD-type 4; degeneratePROSITE-ProRule annotationAdd
    BLAST

    Keywords - Domaini

    Bromodomain, Repeat, Zinc-finger

    Phylogenomic databases

    eggNOGiCOG2940.

    Family and domain databases

    Gene3Di3.30.40.10. 1 hit.
    InterProiIPR001487. Bromodomain.
    IPR003616. Post-SET_dom.
    IPR001214. SET_dom.
    IPR011011. Znf_FYVE_PHD.
    IPR001965. Znf_PHD.
    IPR019787. Znf_PHD-finger.
    IPR001841. Znf_RING.
    IPR013083. Znf_RING/FYVE/PHD.
    [Graphical view]
    PfamiPF00856. SET. 1 hit.
    [Graphical view]
    SMARTiSM00297. BROMO. 1 hit.
    SM00249. PHD. 4 hits.
    SM00508. PostSET. 1 hit.
    SM00184. RING. 1 hit.
    SM00317. SET. 1 hit.
    [Graphical view]
    SUPFAMiSSF47370. SSF47370. 1 hit.
    SSF57903. SSF57903. 1 hit.
    PROSITEiPS50014. BROMODOMAIN_2. 1 hit.
    PS50868. POST_SET. 1 hit.
    PS50280. SET. 1 hit.
    PS01359. ZF_PHD_1. 1 hit.
    PS50016. ZF_PHD_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C6KTD2-1 [UniParc]FASTAAdd to Basket

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    MSENSDEGKM QKGKGNEMNE DKIICKKEES NSSSYKFISF IKTIEDVKEK     50
    WKSSNLSRMD VLKLKNDDIN NDDNMNNMDN MNNMNNMNNI NNMNNMNNIN 100
    NMNNMNNINN MNNMNNMNNM DNMNNNEKHP CSNNNYSFNN YIKESINYNT 150
    CTGYDKNNIM LNFLDKHKKS IFLKSRNNVN TFQSDINSSK TSSFFSCMSL 200
    KNMNYHNDIN KYSNYRMMKN INGLHKLMIL KNKNKDKKLF TNTSDKKNYY 250
    CLNNGDHIIN EKDSFSDTYI SYGCRKRRWK KKKKNIYNML FYDESINDYP 300
    YKNLEKTTFS NSSKIYELFF NKYKKKKILN IECSGNKYKG LLRTNHFPPY 350
    ANFNFTIRRK LQTSNVLGHF MISKCNFNRT ICYRKYIKCV NKYKNNKRNR 400
    VINMYVKKEN VDSIKGTFGN MNNGVHHNNS RRRLNNTSKN NISNNNNNML 450
    KKKKGKKNYK GSFDQMIQED TTLDQAKKES IKTVSKNERK NNMNKHSHDN 500
    KVSKLNKRMS NKRRNNKNCN PSNDMCNEDD VIEKICTTEE VNDDEKKKKL 550
    SRHKKFVCER KKGVILQNNN KCKKKNDDNI INNNNDDVNN CGDNINDHHD 600
    NRKDYDTTED QNKCPKILSI NFIKCDEKLF EKIYNDMFLR IGKIVTNKRK 650
    KYFLIYKIVK DSFFRILILN TEKLEKNILQ VMAVQDVILC DKNVKIYSDP 700
    IYIRNNNKLY AIKFLKIFSL KYMKKVKNMS EVNFSDDDEC KKENKDNISE 750
    SSKRSNNIGE KKMLHVEKSE EHDDMTSDSN KEDTKIEEGR KKSNEVNIDV 800
    DDGEEEENVN NNDNNNDNNN DNDNSSDNNN NDDGSNDTES CSKINKSKYK 850
    GKEKKDVKEN TDDKNLSDSN SNNSKKKFKV LNKAIKKDND KKKKYEKKNI 900
    EGNSNNNMIL VRSNSSSTST SNSSSKSKSS NCRNKKNNQI SICSKMDEKN 950
    SEQKKKNIKK KNKTCNEGKS KKDSTKLNCV KKVKNKSTDK KNGKSKINIK 1000
    NEKKKKINNS KINKGRKGIN KKDKGKGDDN NYVCLIYDDE KKFYFNFKKF 1050
    KDIINVIKGS DESTRFYVDT NNNNHNNNMK KKMKLFKKVE KSLYLENLDI 1100
    DTDEILFRRP KFFNCIIEES FENYDINYEG EDGNFYVFKN KLNKIRKKVT 1150
    IKNETDSSDM YIELKDEEKG FKYIGYRVSF ELKKDNKKKA QVKVGIIKYY 1200
    SPKYKQFFIH HLENYKLYQT SDLSKGNNNN NNNNMKENGF VKCGRNSYSR 1250
    ACSKSLNSSI YINKYKNVEL NEKITNIIDD DNNNNINSSC IYKNNLSNEN 1300
    NLCADKVLCD GNYNMLENDV DEMNNVDQNQ KKRNDLVFSD VKGWYSPYFY 1350
    NIKILNNYKE FERFDILEKC DKKKEMTDHV NNTLNKNEIC SICSKRILFM 1400
    KGHDHYSCSL SSAIYDMCSE AEKKEIDENN CIDIYWGIKC FTCEKKYHAN 1450
    CLEDDVLITK WFDKNILMKE YKKFIYKNSL KKEKRYFNNN GKNKRTKNGK 1500
    KKKNTIHKLE DKNNSHVVST ASNSHSIEVS SSESAKKGNE KNTATCKKRK 1550
    TSCSALYKKV KKGKNKNGEN KNGENKNGDI KNDDIKNDDI KNDDIRNDDD 1600
    KNDENEENTK ECKNESNNID NNNSSNDSLS DVDNNKDNGK SKNKKYRRCI 1650
    NYIPSVEHSD ITYKKFICKD CYRCIYCCES IYDYKQTPNV ANYVICKNCN 1700
    MVAHGSCCFP NVPDIYLFNW KCDDCLKCNK CNYSNLCYIN YNEWELHLDC 1750
    CINCYKEYEK KNFCIMCNEK YDEDDSKKWV QCDVCKFWIH LSCDKNESRN 1800
    IETLSNKNID YKCPTCSIGT FHDKIERILY LLFLLDKYKN FTFHVPINYS 1850
    IYWRIVKIPM NLYIMKKKIW EKKYDTILDF LYDFMLIIHN AKMVHMPNTP 1900
    IYKNACIFEK KGRVIIKNMF NMTNEYLNKC IEDCVENYKN EINNLDSFQI 1950
    GHDNNNNNDN NINNNNKMEG VNNESVIFMN DGCNNKLYNK EGTNMTCVNM 2000
    DSINKNLNDM NNNNNNNNKM EVFCGQNNIK LNEYYINKEG YNIISNDNNM 2050
    NYDNYNNVQN IGMKKMYTNI NDYNSSNVPN ESVYNKENFI NNSSIYNINE 2100
    NNTYDLNCDK KLIFDNKYNL SAYQNEGDIM NYNGMYQKNI NISNPPYNNN 2150
    NNNNNNMVKE GEKYILNNDD MNNISISKDN DINNNCNNIA NIYRKRKLEQ 2200
    YKKDITQYEL YELFDFKNDS FFINRNKEMF SCSSNDHNLI DYNILYVKLN 2250
    GKIYFNTFYD KHDEFDVCKI LKVHFLKNNR RGGGNHIMCP KIRNNQNLKE 2300
    DVTQCDEEKI EQNNDNGCDD EYDNNNNNNN NIGSSSISSI NKIHMNDTYN 2350
    NSINDNSLRH NNNCSVFINS NIFMIDVLNE KVKINNIVKE TKRIISPINN 2400
    VLKFLKCIQI VFFYDNNTNE CTEKEKNVIS SNLCNNNFEK YVNINSIDHN 2450
    NMSGEKKRKS VEEIMSVVDN KSYYGFNKCS EYILYSSNEY DRAKKKENKR 2500
    IKLLKNDILK ECCYICGSIE YKNNFIYCCI CGISVHYSCA NIVHPFLFNL 2550
    NDYKDHKKEI NNILNIITRN FKCDNCIKCD NCLLHFDSSL KHNLYFKLKN 2600
    LNVSCNNNRM ERRTYNYLYD VKIKVFTTNK EGTKQTGKCV MKTKENDIIK 2650
    LDEDNKQKDE LNEANKECFY KQDDVHVEKN CDELLYKNSF NSEECNKNEK 2700
    KKNDNNVDEN DDNVDKNDDN NNNNNNGDDN NNIDNTLVDG DMNKLENDLN 2750
    NSNDFSINEE KKNNKDTKKY MISSKEEINK EIENVSNQMD NKNNDVDKKK 2800
    NISNEEIILD NTKNSCHDND SNVLYNESVK KSFNACKIEK KEGIEKDDNL 2850
    GHVNKLRNKR LIKILSIREE GNKLVKCFCC GKPSHDECFY IIDNNTYKNK 2900
    ICTLKKTVKN YVRKKNVENK CNTKVEMNSD VILLDDNIKD HCSVNKTGDE 2950
    HMNNNEFIDI SKDKISEHNI LDESFNSGVV CSDKNRKDQV VFIDGDVKNN 3000
    DISIIEENVT YYTSKEVNNN SVLKNERDVE STSELYIGGD KHVYNKLETD 3050
    NAEMESNNNN NNNNNNSDCN NNVSTLSTAA VNTINRSHMS PQKNDNDMNK 3100
    INQDDIIHTK MNDKKNVKDD NGNMTNLNNN IDKNDRNLDT ILKEHSVIMQ 3150
    KLDELKENRN KEHDGEFYNN LILNNQFLIH SFKVEEGVEI NKDSIIINKK 3200
    MFNKYILNKI YELLDNKKRV RIKDLFNLFN LDEFRCSFIL YEVLNALNTY 3250
    LNEKLKEYNL TKIRNGTYKK YENEIRNENF CLFNKYLIVN NRDKINITKV 3300
    VLKIQSLITE ILSDAMNGNI VDEKDKSKKK ESISSDFNVV NNVKEYNIQN 3350
    GCINIDINNY FKGEYINFKP ILCSSQFNLD TNAQIFLQNK ANLSMFQKSA 3400
    SYNNNFENNL ENNFVNNKMN NMNNMKNNMN NMNNIMNNIM NNNMNNIMNN 3450
    IMNNNMNNII NNNNIFNNDV SNNVDMQHKS DQICIFNSNN IHSVPIFNNK 3500
    PYMDNNFNNM VLVNKSNDIN GDDILCNMKN LYNKSVCNKQ EKNGYSVVHK 3550
    NICDVNFPYN DTKIWNGDIT NKSKTYTYTN INNNGSVIDY RKWSSVNRSV 3600
    SMNNMNCIRS NTNPRILSGT DHILKNNHMN KRNNVNNTYG VNNVNNVNNV 3650
    NNTNNVSCFM MRRKIRSNSL HDMNDKMNKM NDNINININN LNIINNNINI 3700
    CNMNYPIDRV DSMNNTFNRN NIIISQNTKE NTNILNFNGN DFCNNNNNNN 3750
    NIINKENNFG TSNFNSPFHV GNLAKSYSYN NTMSEKNMNE VICPNVRNNM 3800
    SNMNNMNNMN NMNNMNNMNN MNNMNNMDSI NNVISYSCTN PNMKDINFNS 3850
    MRRSSSTPKK STGLLKNYFN IDIDQYNKTN SHIMNYNVSI NNDMNNVYIN 3900
    NNNNHNNNNN NSCNNFINND VINMNNVGTF YNFNQNAESY NNISNNIKCS 3950
    NINNIIINNN MNVNNLNYFC NNKEVGFKEN DLNINQKVHT INKDPYEMNH 4000
    SKMYVTFPYC NTKDNNSNKS SLKSNVLRLD KIRNRNIKKP LLYNRSSSMH 4050
    SSDNLIYNVH NNNRNSPAEF TSDIIINKER NMENNYNTSI NYVNNNITNN 4100
    IIVANNNCYH TANNFIQINY SPSSSNIVNI NKDSYKYDIS LENCIDLGST 4150
    NTCMYNLNNI HNKDINNMPL EDCFSHIGSC PNEQNEHEDE INEDNKKDVT 4200
    KQQKKRKLNS VSKKDMLIKK EMNADDNINC KENTLQNESP KKDDELREND 4250
    LKTTTENIKS NEVEDKEFVD KKKKRKLSVK VKVNVNVKVE LQDTENDENK 4300
    EKGIKKEKND EEKKNDAEKK KKENKKGREK SVKVRKTKNQ TQVERENEKE 4350
    NLMENVTNDK TSDIINNKTS DIINNKTSDI INNKTSDIIN NKTSDIINNK 4400
    TSDIINNKTS DIINDKTNDI INNKTSDCLS LVQNNKPVIH IDCNTSLDIT 4450
    DGYNNLISCE GRKKGKYNIE ENNINDDNMF QYSDAFDSEG SIKYKEEYDK 4500
    IYIPNNKNKI NNINNFLIKN NLLLKSKFMR ITPNTYLCRN CVLLYQNDFS 4550
    YNTYEEEINK MERSILNEYE KGVIKKNEYV HDAIQNDKVV NTDENIMTNV 4600
    LADKVDDMKI VEKLNCPLNV EEKGIEENIL YVKREGDELI NYGKHNDQMK 4650
    EEEESEVVLG DVDFLKNEKK DNLILPYDEK YTGVNNNNSS IIMSLKKCDK 4700
    NITKKKGKDK NFNNIKYFKI DNNKSLWYEN YMYWMNKISL YNNLFFTNMY 4750
    YKENVIKCID MNNLFLNKMN IYKCSICCML YHCSNMDRNN FFIKNEDKMR 4800
    KKTKKNDCLK LLYICNLCTI KYDYVLKIIT YKENNKCWNE FYTDNYYKNN 4850
    FYELVYFIIK IIYKNIYINN FFNIFCSIMD NIFKEHKTLN MKLLSLFLFS 4900
    NKYFKYEEFY HFFNNKMKKD DRVFKKTFHM KNVCFMPRYS KKSIMYYIFS 4950
    LFCNKIYNIN KKKKCIHNKR SYIHNKQSYI HNKRTDVMYD NNVYFHLYEL 5000
    ARKKLYDYSE KSQKPFDEII NMCLYLLYLY YLCNVLYKCV RINNVLKGDK 5050
    DKGDILCDNK KMKYYKKRKN IKLFLNIINS NEYINVNKIF HGKCIYELPF 5100
    YVNKERIKKK RNSVREFINN NDNNQENNAD KKKDHHIYNQ NYNHNSYLCD 5150
    IGKVDESLHS KEDNKKDVII TNNASIDSTS PSINMNKSVV SSIYSYNSNK 5200
    EKKKNMRKCI KGLHHTIKNK LNLYVKLMLD KYIQESSNYI KNENKDIKKT 5250
    IESKNKDDKI CLLCNFSNYI YKGRLIPFYD IYIHSECLKW SLNCTQCCYE 5300
    ENKNKTIVNN DNGTKVDVNL DNADDIINNN NMNMLDNNMN GPIKNNEENN 5350
    NNNDNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 5400
    KSKKNTQKKK DHVNDVKINQ NNSNNKNNKK KKTSKDNEEL KSDNTKNNKT 5450
    KDSDGNNNDK TKLEKINLIH NKQSNEISCK IDNNNIINDI STNNPYMKEK 5500
    KCKNKEKNRG SKNNNIKNIK LIDMCEWKED RNFYNIYENM IEVDEDNVKE 5550
    IIFDSIKSTC FLCGYNNASV YCSNEDCNVK FHLNCAFYST VIKDPSNNPF 5600
    FRYLKCFNLV EFNKDTIFYK NMYHDPNVNN SVSSHVCTDN RYYKEMIEKN 5650
    YVDIFPVHII YKIKKIWCNK CWNKKKIYNL FYIQKCFMSP YYYDNIKTEE 5700
    SVPNKITPMK KDKSDITNEV KEEKDDDILY DSKVHKEYFT LRNILMDDNL 5750
    LNNIIRNKKS CSMEIQENND KMKGDNNIDN EDVRNVLCDG EERVSYNRNK 5800
    LNDILLKMDM KDILKYFIDF YFENGSYYIL DNILYSVNHC VKIKYKKKSL 5850
    YNIQDVLNKE TKIGTMMREL EGLISKYVNR SNDNNYMDRK YDMLLLKNIK 5900
    SDINNDNNND INNNDNNNNE NNNENINDNN NNNNNNNNNN NNNNSNNNNN 5950
    NNYYYYHNNE GKYNEQGSYQ HIDIQNIIND KSVENLIKGY FILKNFLHIG 6000
    NNNITLQNED LLILKKSENS FVHNLYDNDK VYNVHVPYVY TKKMNTSYMN 6050
    KKENDKKYNK SVNKNSCKSK NSILDNINFD KNKNKITKKY TAFIIDNNEY 6100
    TTDCSNEENN TSDDEENENR KNENDDDNIP EHIKMNNIMN SQQKKENDFK 6150
    NINLYFQLTN VIKKVSINKL EGNFFNYEEK GNLLGSNVSK IKMNELLECN 6200
    VGEENFCDDD QKFSDNKNYA SDDEEKKKKK RKNQTRFYNY PKRISTTNNN 6250
    KNVNVLVNSL NNNLINKKEY FLNIIMNENN DLYMKKINEK YFPNYHPKKR 6300
    KKKKLDNTSY INHNYNYNYP YNYNLLSNNS KSRILKVGCH NILNIGDILK 6350
    YDGDKIIYPC GYLNMRIFYN LPSYYLFQIY KNANIDDINR KTKLLEKIFL 6400
    QLRATYIFSI TLREQNFFFS ILLFPLINID YFSESDATNF ILAEGYNINE 6450
    VYMKFLSLFN SQNYICDDMN NDYSHYNAKY GNIYKCLETY ILKSVEHNKF 6500
    IDSHTFFGLT LPCVVYQIKY KLFKYMYKHL SEKIKTYIKK SKDSVMKKRI 6550
    KGCTREVVYN DNVLCKYSNL DTTIFKENEK ENEKNIRKTV KYKYNINSAM 6600
    SYRYLMNISS NLRLYVKKSS IHGYGLYTCE FINEGEPVIE YIGEYIRNII 6650
    SDKREKYYDK IESSCYMFRL NENIIIDATK WGNVSRFINH SCEPNCFCKI 6700
    VSCDQNLKHI VIFAKRDIAA HEEITYDYQF GVESEGKKLI CLCGSSTCLG 6750
    RMN 6753
    Length:6,753
    Mass (Da):796,045
    Last modified:September 1, 2009 - v1
    Checksum:iEF689CABCFA20F00
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL844505 Genomic DNA. Translation: CAG25109.2.
    RefSeqiXP_966279.2. XM_961186.2.

    Genome annotation databases

    EnsemblProtistsiPFF1440w:mRNA; PFF1440w:pep; PFF1440w.
    GeneIDi3885750.
    KEGGipfa:PFF1440w.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL844505 Genomic DNA. Translation: CAG25109.2 .
    RefSeqi XP_966279.2. XM_961186.2.

    3D structure databases

    ProteinModelPortali C6KTD2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 1210423. 12 interactions.
    STRINGi 5833.PFF1440w-1.

    Proteomic databases

    PRIDEi C6KTD2.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi PFF1440w:mRNA ; PFF1440w:pep ; PFF1440w .
    GeneIDi 3885750.
    KEGGi pfa:PFF1440w.

    Organism-specific databases

    EuPathDBi PlasmoDB:PF3D7_0629700.

    Phylogenomic databases

    eggNOGi COG2940.

    Family and domain databases

    Gene3Di 3.30.40.10. 1 hit.
    InterProi IPR001487. Bromodomain.
    IPR003616. Post-SET_dom.
    IPR001214. SET_dom.
    IPR011011. Znf_FYVE_PHD.
    IPR001965. Znf_PHD.
    IPR019787. Znf_PHD-finger.
    IPR001841. Znf_RING.
    IPR013083. Znf_RING/FYVE/PHD.
    [Graphical view ]
    Pfami PF00856. SET. 1 hit.
    [Graphical view ]
    SMARTi SM00297. BROMO. 1 hit.
    SM00249. PHD. 4 hits.
    SM00508. PostSET. 1 hit.
    SM00184. RING. 1 hit.
    SM00317. SET. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47370. SSF47370. 1 hit.
    SSF57903. SSF57903. 1 hit.
    PROSITEi PS50014. BROMODOMAIN_2. 1 hit.
    PS50868. POST_SET. 1 hit.
    PS50280. SET. 1 hit.
    PS01359. ZF_PHD_1. 1 hit.
    PS50016. ZF_PHD_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Isolate 3D7.
    2. "Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13."
      Hall N., Pain A., Berriman M., Churcher C.M., Harris B., Harris D., Mungall K.L., Bowman S., Atkin R., Baker S., Barron A., Brooks K., Buckee C.O., Burrows C., Cherevach I., Chillingworth C., Chillingworth T., Christodoulou Z.
      , Clark L., Clark R., Corton C., Cronin A., Davies R.M., Davis P., Dear P., Dearden F., Doggett J., Feltwell T., Goble A., Goodhead I., Gwilliam R., Hamlin N., Hance Z., Harper D., Hauser H., Hornsby T., Holroyd S., Horrocks P., Humphray S., Jagels K., James K.D., Johnson D., Kerhornou A., Knights A., Konfortov B., Kyes S., Larke N., Lawson D., Lennard N., Line A., Maddison M., Mclean J., Mooney P., Moule S., Murphy L., Oliver K., Ormond D., Price C., Quail M.A., Rabbinowitsch E., Rajandream M.A., Rutter S., Rutherford K.M., Sanders M., Simmonds M., Seeger K., Sharp S., Smith R., Squares R., Squares S., Stevens K., Taylor K., Tivey A., Unwin L., Whitehead S., Woodward J.R., Sulston J.E., Craig A., Newbold C., Barrell B.G.
      Nature 419:527-531(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Isolate 3D7.
    3. "Rapid identification of malaria vaccine candidates based on alpha-helical coiled coil protein motif."
      Villard V., Agak G.W., Frank G., Jafarshad A., Servis C., Nebie I., Sirima S.B., Felger I., Arevalo-Herrera M., Herrera S., Heitz F., Baecker V., Druilhe P., Kajava A.V., Corradin G.
      PLoS ONE 2:E645-E645(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: SYNTHESIS OF 3412-3441, POSSIBLE CANDIDATE MALARIA EPITOPE.
    4. "Histone lysine methyltransferases and demethylases in Plasmodium falciparum."
      Cui L., Fan Q., Cui L., Miao J.
      Int. J. Parasitol. 38:1083-1097(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: DEVELOPMENTAL STAGE.

    Entry informationi

    Entry nameiSET1_PLAF7
    AccessioniPrimary (citable) accession number: C6KTD2
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 3, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)

    Miscellaneousi

    Miscellaneous

    Possible candidate for an effective malaria vaccine as determined by epitope response in sera.1 Publication

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3