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Protein
Submitted name:

SNF2 helicase, putative

Gene

PF3D7_0624600

Organism
Plasmodium falciparum (isolate 3D7)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  • ATP binding Source: InterPro
  • ATP-dependent helicase activity Source: GeneDB
  • metal ion binding Source: UniProtKB-KW
  • RNA binding Source: GeneDB

GO - Biological processi

  • chromatin remodeling Source: GeneDB

Keywordsi

Molecular functionHelicaseImported, Hydrolase
LigandATP-binding, Metal-binding, Nucleotide-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
SNF2 helicase, putativeImported (EC:3.6.4.12Imported)
Gene namesi
ORF Names:PF3D7_0624600Imported
OrganismiPlasmodium falciparum (isolate 3D7)Imported
Taxonomic identifieri36329 [NCBI]
Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiidaePlasmodiumPlasmodium (Laverania)
Proteomesi
  • UP000001450 Componenti: Chromosome 6

Organism-specific databases

EuPathDBiPlasmoDB:PF3D7_0624600.

Subcellular locationi

GO - Cellular componenti

  • nucleus Source: GeneDB

Interactioni

Protein-protein interaction databases

IntActiC6KT82. 12 interactors.

Structurei

3D structure databases

ProteinModelPortaliC6KT82.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini52 – 118PHD-typeInterPro annotationAdd BLAST67
Domaini72 – 116RING-typeInterPro annotationAdd BLAST45
Domaini144 – 191PHD-typeInterPro annotationAdd BLAST48
Domaini349 – 516Helicase ATP-bindingInterPro annotationAdd BLAST168
Domaini1066 – 1232Helicase C-terminalInterPro annotationAdd BLAST167

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1345 – 1365Sequence analysisAdd BLAST21
Coiled coili1567 – 1616Sequence analysisAdd BLAST50
Coiled coili1966 – 2003Sequence analysisAdd BLAST38

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

InParanoidiC6KT82.
OMAiRWHECCL.

Family and domain databases

CDDicd00079. HELICc. 1 hit.
Gene3Di3.30.40.10. 5 hits.
InterProiView protein in InterPro
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
IPR019786. Zinc_finger_PHD-type_CS.
IPR011011. Znf_FYVE_PHD.
IPR001965. Znf_PHD.
IPR019787. Znf_PHD-finger.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
PfamiView protein in Pfam
PF00271. Helicase_C. 1 hit.
PF00628. PHD. 1 hit.
PF00176. SNF2_N. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SM00249. PHD. 5 hits.
SM00184. RING. 4 hits.
SUPFAMiSSF52540. SSF52540. 2 hits.
SSF57903. SSF57903. 4 hits.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS01359. ZF_PHD_1. 2 hits.
PS50016. ZF_PHD_2. 2 hits.
PS50089. ZF_RING_2. 1 hit.

Sequencei

Sequence statusi: Complete.

C6KT82-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRIRKTWCTL CRENFEEGDE CIQCKQCKKK FHRECLQAEG LMDNEQLKDI
60 70 80 90 100
KNYVCYQCIN EDDDIPENED RCKICREKSA NLILLLCDGC PNSYHVSCLG
110 120 130 140 150
LAAEPESEKW YCPICKPDDH KNLDVRRMRK GFVLDNMNGE HVNSSTCYVC
160 170 180 190 200
QRPGKLLGCD FCPNSFHPTC LPDLDFDNIS DQWECPCCKN EDPLLNQGHK
210 220 230 240 250
RWTKNEIQEI MKKRQRELGF WRSKIIKYRN RFLLAHRKDL QPFVNPRVFS
260 270 280 290 300
NLTKTFKNDY FHTKGSSNNK KSNKYDNDKY NSKKDVDMDS KEFNEFISSL
310 320 330 340 350
EDEAHQNACK FIESVFLSVY YPNGRKIERR PLVDNVQLKP HQEDGVEWLL
360 370 380 390 400
KSFLTGGAIL ADEMGLGKTI QTLCFLSYLK CNKIDGPHLI VVPLSTVGNW
410 420 430 440 450
LREIHRFTPH LTCIKICGSK NERTHAKEDR LAEKGLYDLY VTTYETVKNE
460 470 480 490 500
EEFFVETIPK WQCIVLDEAH RIKNQSGAIR HSMDRVVGNM RLLLTGTPLQ
510 520 530 540 550
NNSAELFTLI NFMFPDIFKN SEIIEQAFMN ASQNNKNKSN NNNNNNNKDE
560 570 580 590 600
KNNNNDDDDD GGGGGGGANT SGNNTSKVNV NIGNIDLKSA IKEEDLKSIR
610 620 630 640 650
CLLDKIMLRR LKEQAITLPK KIFHDVWLPL GTLSAHWYKR LLDIRSMVEE
660 670 680 690 700
KVSVKKLLGL VIKMRIICGH PKGIVSRPSQ MEKLFAFFEE ESEDIKEQVK
710 720 730 740 750
NDALKLKNIS GEEHIESSSK LIFIDKLLCQ LHYENCKYVK NYASSYEKHK
760 770 780 790 800
KEVAAYNYHK IQEQTNAQKK KREHSGKFKK IEALENSPLF MEIYNKGKFD
810 820 830 840 850
LKPTSQKEDM LKSFMHSVPV DNECPYKKKR CIYDKVKEYV KNNSNIKHKG
860 870 880 890 900
RARLISDNNK NNKNDDNSDD EDDDEEEDEV NYYNKRKDKK KKVISDDDDD
910 920 930 940 950
DDDDENSNDD NKSEDNNNDD NNNDDNKDIT KNDNNGNFSD NNNNNNNIND
960 970 980 990 1000
DQNDDNIFSL HDSSKINNNI KEFLKSEKME MSNNTDKINE DSTVGVTDKG
1010 1020 1030 1040 1050
DNKLDDFDML KREEKEKNDA YMKEEGEEYD EEDVITHKNG TQLNIDNNNN
1060 1070 1080 1090 1100
NNNNINNVTD LKLQTDEKKV VINIKNEMND NDENGEKLGE AKMHKVLIFT
1110 1120 1130 1140 1150
QFQLVLDELE EYCKYRCWKY MRLDGSTNKL IRELDIREFN LSDSIYFIYL
1160 1170 1180 1190 1200
ISTRAGGLGI NLTAANHVIM YDEDWNPFID LQAIDRAHRI GQKREVNVWK
1210 1220 1230 1240 1250
LMTEWTVEER MAFRREQKLK LDKLVVQTQD DEDMLDNFEE KLSSDEIRKL
1260 1270 1280 1290 1300
MLHGKAAIQN MDVESTNNFP LEFFIERGRQ KLPIINGVDL EREEKCAIEE
1310 1320 1330 1340 1350
EINKKDDGDD ILVSKNDEDD DDDDDNSVDA KYNNNNDDDN AIDIDEVMMD
1360 1370 1380 1390 1400
EAEELESRNN NTNNNNNNND GTGGSGEMIN GQFSSSNNQN NNNNNNNNND
1410 1420 1430 1440 1450
ISLWRSVRER KKPQILYTPE YWGRKQEVKQ IKHEYRCFIC NNTKNHKAIV
1460 1470 1480 1490 1500
KDRNGNDIEI DYGDMINCFR CPKTYHKLCE GIKDENVKKT WTCSWHECCL
1510 1520 1530 1540 1550
CFRKSSQCGN LLIHCATCPT SFCYNCFPPD YVRYYVGEEY YHNLRQRGVN
1560 1570 1580 1590 1600
FTPQNWVCFL CSKCKAVEEQ KKRRKMTKEE RENEKQLQKE LRSQLHDSKQ
1610 1620 1630 1640 1650
EELEAKKRKR AQQLERDKFI IENRKRIDAL DQQYEDQLRK AYENVFPNNF
1660 1670 1680 1690 1700
VKELVNRIEH AKMLKQKGIV EDNNNNNNNN KETNKKKSTT FLHTKLPSKL
1710 1720 1730 1740 1750
LVLCENCKLP CHANYKYPGK CCYPPELDKS YYMSNTSFSQ MGRDGFEKRV
1760 1770 1780 1790 1800
SEGKNDSCSS HIHFKDKVGE DSNNMKNITN IVDGNKIMNS SPHKGGTKCE
1810 1820 1830 1840 1850
PNEGSTTPSR NDGIKKDLMV TSTINNNNSN NNNNSNNNNN NNNSYNFNEN
1860 1870 1880 1890 1900
KENSSSTNKL MSNKGIEYNK NDDEDYNNNE SKDKIMKGVG TTFLSDGSMR
1910 1920 1930 1940 1950
FEKDSPENNM NENNNMNNNN NNEKDSPQNN NDNTSKSKTR KFLRAVCSKC
1960 1970 1980 1990 2000
GTVQLGKLAH FRKHCDKLTE EEKKEYDEKR EKLKELINLL NKKKIKEEHT
2010 2020 2030 2040 2050
EEEYKNMSVF KFKSLYSNYQ DKADDILEDC IRSMKWDILI ADKKKIIKKE
2060 2070 2080 2090 2100
KEKENKKIYS KNDDDNNNNN NNNNKKNNNI TSMSLKAKLT HFLSNQPLTI
2110 2120 2130 2140 2150
SSDYSDTKDI IEIRSDLTDD MKEKINDELC TISGKRKKCI VKNIKKVKKK
2160 2170 2180 2190 2200
KGNDDNDENN NNSNNNVDGD KKNNNKSNTS SKKKDDKDLK KLNLLINPFH
2210 2220 2230 2240 2250
EKLIKDTHNA NFIRDSFNED FLNKAKEFLR VTKSNLINNG NNNNNNKNKK
2260 2270 2280 2290 2300
SSSNSKNINK NSSNTKNSSN TKSSSNTKSS SNTKNKNNKN NHNNSFLESA
2310 2320 2330 2340 2350
TTAEDFLRGI TTGNNNIFNL VSSSNSPYDK NKKLKDDEFE KSIIQNYLNK
2360 2370 2380 2390 2400
MKNSLKNSSH LDKNTIKEKL KELNYVNSRS NSNTKNNMNT NIINNNNNNN
2410 2420 2430 2440 2450
NNQHTISAQE NSLRFAKEIF KNGAFDKNGN FKLYANKGNL CNTNKDIVHL
2460 2470 2480 2490 2500
LKSNEQIENM NKNSGYSIND FNLDIFNIDK NIKCEDLEKK LLNLCASTNL
2510 2520 2530 2540 2550
MNKKNIQHDN NKKEDNKNYM LDSKNKNKQF LFKKDNTQQQ EAFLSNISKA
2560 2570 2580 2590 2600
KKESSNSRKR VVEDVNVDYD IKKITNTSEN SGPNKVQEYI LYRRNTSSVM
2610 2620 2630 2640 2650
SNVINNNDKS KNVRNDDEDD DDDEDDDEED DEDKNESSNY NNNKKKKTNT
2660 2670 2680 2690 2700
SSRNSSNNNS SNKNKNNKSG NDIHQASNLL YQNLLNNPQS LLQHLNLEDV
2710
KNFLKAADRS NNDNLPEIN
Length:2,719
Mass (Da):315,620
Last modified:September 1, 2009 - v1
Checksum:iF5B02218A662396E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL844505 Genomic DNA. Translation: CAG25058.1.
RefSeqiXP_966228.1. XM_961135.1.

Genome annotation databases

EnsemblProtistsiCAG25058; CAG25058; PF3D7_0624600.
GeneDBiPF3D7_0624600.1:pep.
GeneIDi3885918.
KEGGipfa:PFF1185w.

Similar proteinsi

Entry informationi

Entry nameiC6KT82_PLAF7
AccessioniPrimary (citable) accession number: C6KT82
Entry historyiIntegrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: December 20, 2017
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported