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C6K2M8 (C6K2M8_CPVBM) Unreviewed, UniProtKB/TrEMBL

Last modified July 24, 2013. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:VP5 EMBL ACS44242.1
OrganismBombyx mori cytoplasmic polyhedrosis virus (BmCPV) EMBL ACS44242.1
Taxonomic identifier110829 [NCBI]
Taxonomic lineageVirusesdsRNA virusesReoviridaeSpinareovirinaeCypovirus
Virus hostBombyx mori (Silk moth) [TaxID: 7091]

Protein attributes

Sequence length448 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical term3D-structure PDB 3IZ3 PDB 3IZX PDB 3J17
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
C6K2M8 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 4EDB4A9BB8CF6DED

FASTA44849,853
        10         20         30         40         50         60 
MLQQPTGGYT TLEQFAFTIR NDGTNATPTQ FLQLLSYEAT ENELVKKTIP TPETHLPSAR 

        70         80         90        100        110        120 
NVPGNVYIED AITQALFGIS AQNVNAHGYF SRLSALALPN TSARLGLDGV IYNSETINIP 

       130        140        150        160        170        180 
FYDPAAVANF AATYAKLGNA STPRYRADMI DIYAHVGLEL AGTDAERAAG VMPVKRAKFD 

       190        200        210        220        230        240 
SWEGSLISLS RDVVNWKILA FLIDLCSLEG EALRAFKTRN RDVFRMMLFI MSTAVAANVV 

       250        260        270        280        290        300 
NRKVTKRVDR VLEYIGVNSM RTAGRTATIT YDLSRHEFAA KFLQLTFTRW NAASAMIRSM 

       310        320        330        340        350        360 
PDMHTPRTSI TPAGENALVR HNRYMTENFK GLSPIALAQK KHEMMLHTHE IHSMDIDGSI 

       370        380        390        400        410        420 
KNMVERETVN KMNEIDAMNT APWTEEFAEV EPTTVYERHQ IGTDPEQTQL ISQDAAVIVH 

       430        440 
QASSDVDENE YGNSVSELTI DTQSDSVL 

« Hide

References

[1]Meng X.K., Gong C.L., Cao G.L., Xue R.Y., Zhu Y.X.
Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Suzhou EMBL ACS44242.1.
[2]"Atomic model of a cypovirus built from cryo-EM structure provides insight into the mechanism of mRNA capping."
Cheng L., Sun J., Zhang K., Mou Z., Huang X., Ji G., Sun F., Zhang J., Zhu P.
Proc. Natl. Acad. Sci. U.S.A. 108:1373-1378(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY ELECTRON MICROSCOPY (3.90 ANGSTROMS) OF 1-291.
[3]"Atomic model of CPV reveals the mechanism used by this single-shelled virus to economically carry out functions conserved in multishelled reoviruses."
Yu X., Ge P., Jiang J., Atanasov I., Zhou Z.H.
Structure 19:652-661(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY ELECTRON MICROSCOPY (3.10 ANGSTROMS).
[4]"Cryo-EM structure of a transcribing cypovirus."
Yang C., Ji G., Liu H., Zhang K., Liu G., Sun F., Zhu P., Cheng L.
Proc. Natl. Acad. Sci. U.S.A. 109:6118-6123(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: STRUCTURE BY ELECTRON MICROSCOPY (4.10 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GQ150538 Genomic RNA. Translation: ACS44242.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3IZ3electron microscopy3.90D/E1-291[»]
3IZXelectron microscopy3.10D/E1-448[»]
3J17electron microscopy4.10D/E1-448[»]
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-59131N.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameC6K2M8_CPVBM
AccessionPrimary (citable) accession number: C6K2M8
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: July 24, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)