C6K2M8 (C6K2M8_CPVBM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Viral structural protein 5 EMBL ACS44242.1

Gene names

Name:

VP5 EMBL ACS44242.1

Organism

Bombyx mori cytoplasmic polyhedrosis virus (BmCPV) EMBL ACS44242.1

Taxonomic identifier

110829 [NCBI]

Taxonomic lineage

Viruses › dsRNA viruses › Reoviridae › Spinareovirinae › Cypovirus › Cypovirus 1

Virus host

Bombyx mori (Silk moth) [TaxID: 7091]

Protein attributes

Sequence length	448 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 3IZ3 PDB 3IZX PDB 3J17
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	C6K2M8 [UniParc]. Last modified September 1, 2009. Version 1. Checksum: 4EDB4A9BB8CF6DED	FASTA	448	49,853
	10 20 30 40 50 60 MLQQPTGGYT TLEQFAFTIR NDGTNATPTQ FLQLLSYEAT ENELVKKTIP TPETHLPSAR 70 80 90 100 110 120 NVPGNVYIED AITQALFGIS AQNVNAHGYF SRLSALALPN TSARLGLDGV IYNSETINIP 130 140 150 160 170 180 FYDPAAVANF AATYAKLGNA STPRYRADMI DIYAHVGLEL AGTDAERAAG VMPVKRAKFD 190 200 210 220 230 240 SWEGSLISLS RDVVNWKILA FLIDLCSLEG EALRAFKTRN RDVFRMMLFI MSTAVAANVV 250 260 270 280 290 300 NRKVTKRVDR VLEYIGVNSM RTAGRTATIT YDLSRHEFAA KFLQLTFTRW NAASAMIRSM 310 320 330 340 350 360 PDMHTPRTSI TPAGENALVR HNRYMTENFK GLSPIALAQK KHEMMLHTHE IHSMDIDGSI 370 380 390 400 410 420 KNMVERETVN KMNEIDAMNT APWTEEFAEV EPTTVYERHQ IGTDPEQTQL ISQDAAVIVH 430 440 QASSDVDENE YGNSVSELTI DTQSDSVL

References

[1]	Meng X.K., Gong C.L., Cao G.L., Xue R.Y., Zhu Y.X. Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Suzhou EMBL ACS44242.1.
[2]	"Atomic model of a cypovirus built from cryo-EM structure provides insight into the mechanism of mRNA capping." Cheng L., Sun J., Zhang K., Mou Z., Huang X., Ji G., Sun F., Zhang J., Zhu P. Proc. Natl. Acad. Sci. U.S.A. 108:1373-1378(2011) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY ELECTRON MICROSCOPY (3.90 ANGSTROMS) OF 1-291.
[3]	"Atomic model of CPV reveals the mechanism used by this single-shelled virus to economically carry out functions conserved in multishelled reoviruses." Yu X., Ge P., Jiang J., Atanasov I., Zhou Z.H. Structure 19:652-661(2011) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY ELECTRON MICROSCOPY (3.10 ANGSTROMS).
[4]	"Cryo-EM structure of a transcribing cypovirus." Yang C., Ji G., Liu H., Zhang K., Liu G., Sun F., Zhu P., Cheng L. Proc. Natl. Acad. Sci. U.S.A. 109:6118-6123(2012) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY ELECTRON MICROSCOPY (4.10 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

GQ150538 Genomic RNA. Translation: ACS44242.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3IZ3	electron microscopy	3.90	D/E	1-291	[»]
3IZX	electron microscopy	3.10	D/E	1-448	[»]
3J17	electron microscopy	4.10	D/E	1-448	[»]

ModBase

Search...

Protein-protein interaction databases

DIP

DIP-59131N.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Family and domain databases

ProtoNet

Search...

Entry information

Entry name

C6K2M8_CPVBM

Accession

Primary (citable) accession number: C6K2M8

Entry history

Integrated into UniProtKB/TrEMBL:	September 1, 2009
Last sequence update:	September 1, 2009
Last modified:	January 9, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)