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C6K2M8

- C6K2M8_CPVBM

UniProt

C6K2M8 - C6K2M8_CPVBM

Protein
Submitted name:

Viral structural protein 5

Gene

VP5

Organism
Bombyx mori cytoplasmic polyhedrosis virus (BmCPV)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 11 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Viral structural protein 5Imported
    Gene namesi
    Name:VP5Imported
    OrganismiBombyx mori cytoplasmic polyhedrosis virus (BmCPV)Imported
    Taxonomic identifieri110829 [NCBI]
    Taxonomic lineageiVirusesdsRNA virusesReoviridaeSpinareovirinaeCypovirus
    Virus hostiBombyx mori (Silk moth) [TaxID: 7091]

    Interactioni

    Protein-protein interaction databases

    DIPiDIP-59131N.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3IZ3electron microscopy3.90D/E1-291[»]
    3IZXelectron microscopy3.10D/E1-448[»]
    3J17electron microscopy4.10D/E1-448[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Sequencei

    Sequence statusi: Complete.

    C6K2M8-1 [UniParc]FASTAAdd to Basket

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    MLQQPTGGYT TLEQFAFTIR NDGTNATPTQ FLQLLSYEAT ENELVKKTIP    50
    TPETHLPSAR NVPGNVYIED AITQALFGIS AQNVNAHGYF SRLSALALPN 100
    TSARLGLDGV IYNSETINIP FYDPAAVANF AATYAKLGNA STPRYRADMI 150
    DIYAHVGLEL AGTDAERAAG VMPVKRAKFD SWEGSLISLS RDVVNWKILA 200
    FLIDLCSLEG EALRAFKTRN RDVFRMMLFI MSTAVAANVV NRKVTKRVDR 250
    VLEYIGVNSM RTAGRTATIT YDLSRHEFAA KFLQLTFTRW NAASAMIRSM 300
    PDMHTPRTSI TPAGENALVR HNRYMTENFK GLSPIALAQK KHEMMLHTHE 350
    IHSMDIDGSI KNMVERETVN KMNEIDAMNT APWTEEFAEV EPTTVYERHQ 400
    IGTDPEQTQL ISQDAAVIVH QASSDVDENE YGNSVSELTI DTQSDSVL 448
    Length:448
    Mass (Da):49,853
    Last modified:September 1, 2009 - v1
    Checksum:i4EDB4A9BB8CF6DED
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GQ150538 Genomic RNA. Translation: ACS44242.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GQ150538 Genomic RNA. Translation: ACS44242.1 .

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3IZ3 electron microscopy 3.90 D/E 1-291 [» ]
    3IZX electron microscopy 3.10 D/E 1-448 [» ]
    3J17 electron microscopy 4.10 D/E 1-448 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-59131N.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. Meng X.K., Gong C.L., Cao G.L., Xue R.Y., Zhu Y.X.
      Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: SuzhouImported.
    2. "Atomic model of a cypovirus built from cryo-EM structure provides insight into the mechanism of mRNA capping."
      Cheng L., Sun J., Zhang K., Mou Z., Huang X., Ji G., Sun F., Zhang J., Zhu P.
      Proc. Natl. Acad. Sci. U.S.A. 108:1373-1378(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (3.90 ANGSTROMS) OF 1-291.
    3. "Atomic model of CPV reveals the mechanism used by this single-shelled virus to economically carry out functions conserved in multishelled reoviruses."
      Yu X., Ge P., Jiang J., Atanasov I., Zhou Z.H.
      Structure 19:652-661(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (3.10 ANGSTROMS).
    4. Cited for: STRUCTURE BY ELECTRON MICROSCOPY (4.10 ANGSTROMS).

    Entry informationi

    Entry nameiC6K2M8_CPVBM
    AccessioniPrimary (citable) accession number: C6K2M8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 11 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3