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C6K2M8

- C6K2M8_CPVBM

UniProt

C6K2M8 - C6K2M8_CPVBM

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Protein
Submitted name:

Viral structural protein 5

Gene

VP5

Organism
Bombyx mori cytoplasmic polyhedrosis virus (BmCPV)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Viral structural protein 5Imported
Gene namesi
Name:VP5Imported
OrganismiBombyx mori cytoplasmic polyhedrosis virus (BmCPV)Imported
Taxonomic identifieri110829 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesReoviridaeSpinareovirinaeCypovirus
Virus hostiBombyx mori (Silk moth) [TaxID: 7091]

Interactioni

Protein-protein interaction databases

DIPiDIP-59131N.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3IZ3electron microscopy3.90D/E1-291[»]
3IZXelectron microscopy3.10D/E1-448[»]
3J17electron microscopy4.10D/E1-448[»]
ModBaseiSearch...
MobiDBiSearch...

Sequencei

Sequence statusi: Complete.

C6K2M8-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MLQQPTGGYT TLEQFAFTIR NDGTNATPTQ FLQLLSYEAT ENELVKKTIP
60 70 80 90 100
TPETHLPSAR NVPGNVYIED AITQALFGIS AQNVNAHGYF SRLSALALPN
110 120 130 140 150
TSARLGLDGV IYNSETINIP FYDPAAVANF AATYAKLGNA STPRYRADMI
160 170 180 190 200
DIYAHVGLEL AGTDAERAAG VMPVKRAKFD SWEGSLISLS RDVVNWKILA
210 220 230 240 250
FLIDLCSLEG EALRAFKTRN RDVFRMMLFI MSTAVAANVV NRKVTKRVDR
260 270 280 290 300
VLEYIGVNSM RTAGRTATIT YDLSRHEFAA KFLQLTFTRW NAASAMIRSM
310 320 330 340 350
PDMHTPRTSI TPAGENALVR HNRYMTENFK GLSPIALAQK KHEMMLHTHE
360 370 380 390 400
IHSMDIDGSI KNMVERETVN KMNEIDAMNT APWTEEFAEV EPTTVYERHQ
410 420 430 440
IGTDPEQTQL ISQDAAVIVH QASSDVDENE YGNSVSELTI DTQSDSVL
Length:448
Mass (Da):49,853
Last modified:September 1, 2009 - v1
Checksum:i4EDB4A9BB8CF6DED
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GQ150538 Genomic RNA. Translation: ACS44242.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GQ150538 Genomic RNA. Translation: ACS44242.1 .

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3IZ3 electron microscopy 3.90 D/E 1-291 [» ]
3IZX electron microscopy 3.10 D/E 1-448 [» ]
3J17 electron microscopy 4.10 D/E 1-448 [» ]
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

DIPi DIP-59131N.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

ProtoNeti Search...

Publicationsi

  1. Meng X.K., Gong C.L., Cao G.L., Xue R.Y., Zhu Y.X.
    Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: SuzhouImported.
  2. "Atomic model of a cypovirus built from cryo-EM structure provides insight into the mechanism of mRNA capping."
    Cheng L., Sun J., Zhang K., Mou Z., Huang X., Ji G., Sun F., Zhang J., Zhu P.
    Proc. Natl. Acad. Sci. U.S.A. 108:1373-1378(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (3.90 ANGSTROMS) OF 1-291.
  3. "Atomic model of CPV reveals the mechanism used by this single-shelled virus to economically carry out functions conserved in multishelled reoviruses."
    Yu X., Ge P., Jiang J., Atanasov I., Zhou Z.H.
    Structure 19:652-661(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (3.10 ANGSTROMS).
  4. Cited for: STRUCTURE BY ELECTRON MICROSCOPY (4.10 ANGSTROMS).

Entry informationi

Entry nameiC6K2M8_CPVBM
AccessioniPrimary (citable) accession number: C6K2M8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: October 29, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3