C6ILW9 (C6ILW9_9BACE) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 11.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Triosephosphate isomerase HAMAP MF_00147 Short name=TIM HAMAP MF_00147 EC=5.3.1.1 HAMAP MF_00147 Alternative name(s): Triose-phosphate isomerase HAMAP MF_00147 | ||||
| Gene names |
| ||||
| Organism | Bacteroides sp. 1_1_6 EMBL EES68779.1 | ||||
| Taxonomic identifier | 469586 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides |
Protein attributes
| Sequence length | 252 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | D-glyceraldehyde 3-phosphate = glycerone phosphate. HAMAP MF_00147 RuleBase RU000517 |
| Pathway | Carbohydrate biosynthesis; gluconeogenesis. HAMAP MF_00147 RuleBase RU003527 Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate from glycerone phosphate: step 1/1. HAMAP MF_00147 RuleBase RU003527 |
| Subunit structure | Homodimer By similarity. HAMAP MF_00147 |
| Subcellular location | Cytoplasm By similarity HAMAP MF_00147. |
| Sequence similarities | Belongs to the triosephosphate isomerase family. RuleBase RU004162 HAMAP MF_00147 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Gluconeogenesis HAMAP MF_00147 RuleBase RU003527 Glycolysis HAMAP MF_00147 RuleBase RU003527 Pentose shunt HAMAP MF_00147 RuleBase RU003527 |
| Cellular component | Cytoplasm HAMAP MF_00147 |
| Molecular function | Isomerase HAMAP MF_00147 RuleBase RU000517 EMBL EES68779.1 |
| Gene Ontology (GO) | |
| Biological process | gluconeogenesis Inferred from electronic annotation. Source: HAMAP glycolysisInferred from electronic annotation. Source: HAMAP pentose-phosphate shuntInferred from electronic annotation. Source: HAMAP |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | triose-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Sites | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Active site | 96 | 1 | Electrophile By similarity HAMAP MF_00147 | ||||||
| Active site | 167 | 1 | Proton acceptor By similarity HAMAP MF_00147 | ||||||
| Binding site | 9 | 1 | Substrate By similarity HAMAP MF_00147 | ||||||
| Binding site | 11 | 1 | Substrate By similarity HAMAP MF_00147 | ||||||
Sequences
| ||||||||||||||||||
References
| [1] | "The Genome Sequence of Bacteroides sp. strain 1_1_6." The Broad Institute Genome Sequencing Platform Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., Howarth C. Birren B.Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: 1_1_6 EMBL EES68779.1. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | GG695901 Genomic DNA. Translation: EES68779.1. |
3D structure databases | |
| ProteinModelPortal | C6ILW9. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| PATRIC | 30490394. VBIBacSp91036_2495. |
Family and domain databases | |
| HAMAP | MF_00147_B. TIM_B. [Tree] |
| InterPro | IPR013785. Aldolase_TIM. IPR022896. TrioseP_Isoase_bac/euk. IPR000652. Triosephosphate_isomerase. IPR020861. Triosephosphate_isomerase_AS. [Graphical view] |
| Gene3D | G3DSA:3.20.20.70. Aldolase_TIM. 1 hit. |
| PANTHER | PTHR21139. Triophos_ismrse. 1 hit. |
| Pfam | PF00121. TIM. 1 hit. [Graphical view] |
| SUPFAM | SSF51351. Triophos_ismrse. 1 hit. |
| TIGRFAMs | TIGR00419. Tim. 1 hit. |
| PROSITE | PS00171. TIM_1. 1 hit. PS51440. TIM_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | C6ILW9_9BACE | ||||||||
| Accession | Primary (citable) accession number: C6ILW9 | ||||||||
| Entry history |
| ||||||||
| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with