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C6GXE6

- C6GXE6_STRS4

UniProt

C6GXE6 - C6GXE6_STRS4

Protein

dTDP-glucose 4,6-dehydratase

Gene

rmlB

Organism
Streptococcus suis (strain BM407)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 38 (01 Oct 2014)
      Sequence version 1 (01 Sep 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    dTDP-alpha-D-glucose = dTDP-4-dehydro-6-deoxy-alpha-D-glucose + H2O.UniRule annotation

    Cofactori

    NAD.UniRule annotation

    GO - Molecular functioni

    1. coenzyme binding Source: InterPro
    2. dTDP-glucose 4,6-dehydratase activity Source: UniProtKB-EC

    GO - Biological processi

    1. nucleotide-sugar metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationImported

    Enzyme and pathway databases

    BioCyciSSUI568814:GJD0-723-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    dTDP-glucose 4,6-dehydrataseUniRule annotation (EC:4.2.1.46UniRule annotation)
    Gene namesi
    Name:rmlBImported
    Ordered Locus Names:SSUBM407_0659Imported
    OrganismiStreptococcus suis (strain BM407)Imported
    Taxonomic identifieri568814 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
    ProteomesiUP000009077: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi568814.SSUBM407_0659.

    Structurei

    3D structure databases

    ProteinModelPortaliC6GXE6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1088.
    HOGENOMiHOG000168006.
    KOiK01710.
    OMAiEETINWY.
    OrthoDBiEOG6PZXCX.

    Family and domain databases

    Gene3Di3.40.50.720. 1 hit.
    InterProiIPR005888. dTDP_Gluc_deHydtase.
    IPR001509. Epimerase_deHydtase.
    IPR016040. NAD(P)-bd_dom.
    [Graphical view]
    PANTHERiPTHR10366:SF41. PTHR10366:SF41. 1 hit.
    PfamiPF01370. Epimerase. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR01181. dTDP_gluc_dehyt. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C6GXE6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSQFKNIIVT GGAGFIGSNF VHYVYNNHPD VHVTVLDKLT YAGNKANLEA    50
    ILGDRVELVV GDIADAELVD KLAAKADAIV HYAAESHNDN SLNDPSPFIH 100
    TNFIGTYTLL EAARKYDIRF HHVSTDEVYG DLPLREDLPG HGEGPGEKFT 150
    AETNYNPSSP YSSTKAASDL IVKAWVRSFG VKATISNCSN NYGPYQHIEK 200
    FIPRQITNIL AGIKPKLYGE GKNVRDWIHT NDHSTGVWAI LTKGRMGETY 250
    LIGADGEKNN KEVLELILEK MGQPKDAYDH VTDRAGHDLR YAIDASKLRD 300
    ELGWTPQFTD FSQGLEETIQ WYTDNQDWWK AEKEAVEANY AKTQEVIK 348
    Length:348
    Mass (Da):38,932
    Last modified:September 1, 2009 - v1
    Checksum:iEEA3464D7CBCF2A1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FM252032 Genomic DNA. Translation: CAZ55493.1.
    RefSeqiYP_003028418.1. NC_012926.1.

    Genome annotation databases

    EnsemblBacteriaiCAZ55493; CAZ55493; SSUBM407_0659.
    GeneIDi8153488.
    KEGGissb:SSUBM407_0659.
    PATRICi19782087. VBIStrSui1141_0684.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FM252032 Genomic DNA. Translation: CAZ55493.1 .
    RefSeqi YP_003028418.1. NC_012926.1.

    3D structure databases

    ProteinModelPortali C6GXE6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 568814.SSUBM407_0659.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAZ55493 ; CAZ55493 ; SSUBM407_0659 .
    GeneIDi 8153488.
    KEGGi ssb:SSUBM407_0659.
    PATRICi 19782087. VBIStrSui1141_0684.

    Phylogenomic databases

    eggNOGi COG1088.
    HOGENOMi HOG000168006.
    KOi K01710.
    OMAi EETINWY.
    OrthoDBi EOG6PZXCX.

    Enzyme and pathway databases

    BioCyci SSUI568814:GJD0-723-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.720. 1 hit.
    InterProi IPR005888. dTDP_Gluc_deHydtase.
    IPR001509. Epimerase_deHydtase.
    IPR016040. NAD(P)-bd_dom.
    [Graphical view ]
    PANTHERi PTHR10366:SF41. PTHR10366:SF41. 1 hit.
    Pfami PF01370. Epimerase. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR01181. dTDP_gluc_dehyt. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BM407Imported.

    Entry informationi

    Entry nameiC6GXE6_STRS4
    AccessioniPrimary (citable) accession number: C6GXE6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 1, 2009
    Last sequence update: September 1, 2009
    Last modified: October 1, 2014
    This is version 38 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3