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C6EKW0 (C6EKW0_ECOBD) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ureidoglycolate hydrolase HAMAP MF_00616
EC=3.5.3.19 HAMAP MF_00616
Gene names
Name:allA HAMAP MF_00616 EMBL ACT42354.1
Ordered Locus Names:B21_00460, ECBD_3152, ECD_00455
OrganismEscherichia coli (strain B / BL21-DE3) [Complete proteome] [HAMAP]
Taxonomic identifier469008 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length160 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Involved in the anaerobic utilization of allantoin. Reinforces the induction of genes involved in the degradation of allantoin and glyoxylate by producing glyoxylate By similarity. HAMAP MF_00616

Catalytic activity

(S)-ureidoglycolate + H2O = glyoxylate + 2 NH3 + CO2. SAAS SAAS023525 HAMAP MF_00616

Pathway

Nitrogen metabolism; (S)-allantoin degradation; glyoxylate from (S)-ureidoglycolate: step 1/1. SAAS SAAS023525 HAMAP MF_00616

Subunit structure

Homodimer By similarity. SAAS SAAS023525 HAMAP MF_00616

Sequence similarities

Belongs to the ureidoglycolate hydrolase family. HAMAP MF_00616

Sequences

Sequence LengthMass (Da)Tools
C6EKW0 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: E39014610FE93FC6

FASTA16018,223
        10         20         30         40         50         60 
MKLQVLPLSQ EAFSAYGDVI ETQQRDFFHI NNGLVERYHD LALVEILEQD RTLISINRAQ 

        70         80         90        100        110        120 
PANLPLTIHE LERHPLGTQA FIPMKGEVFV VVVALGDDKP DLSTLRAFIT NGEQGVNYHR 

       130        140        150        160 
NVWHHPLFAW QRVTDFLTID RGGSDNCDVE SIPEQELCFA

« Hide

References

[1]"Genome sequences of Escherichia coli B strains REL606 and BL21(DE3)."
Jeong H., Barbe V., Lee C.H., Vallenet D., Yu D.S., Choi S.H., Couloux A., Lee S.W., Yoon S.H., Cattolico L., Hur C.G., Park H.S., Segurens B., Kim S.C., Oh T.K., Lenski R.E., Studier F.W., Daegelen P., Kim J.F.
J. Mol. Biol. 394:644-652(2009) [PubMed: 19786035] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: B / BL21-DE3 [Korea].
[2]"Sequencing and gene expression analysis of Escherichia coli BL21."
Leparc G., Striedner G., Bayer K., Kreil D., Krempl P.M.
Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: B / BL21-DE3 [Austria].
[3]"Complete sequence of Escherichia coli BL21(DE3)."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K.M., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Sorek R., Rubin E.
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: B / BL21-DE3 [JGI].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001665 Genomic DNA. Translation: ACT30152.1.
CP001509 Genomic DNA. Translation: ACT42354.1.
AM946981 Genomic DNA. Translation: CAQ30977.1.

3D structure databases

ProteinModelPortalC6EKW0.
SMRC6EKW0. Positions 1-160.
ModBaseSearch...

Protein-protein interaction databases

STRINGC6EKW0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000156666; EBESCP00000149468; EBESCG00000159135.
EBESCT00000190886; EBESCP00000178702; EBESCG00000187047.
EBESCT00000192892; EBESCP00000182324; EBESCG00000192430.
GenomeReviewsGene locus B21_00460 in contig AM946981_GR.
Gene locus ECD_00455 in contig CP001509_GR.
Gene locus ECBD_3152 in contig CP001665_GR.
KEGGebd:ECBD_3152.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000010044.
OMASQAFIPM.
ProtClustDBPRK03606.

Family and domain databases

HAMAPMF_00616. Ureidogly_hydro.
[Tree]
InterProIPR011051. Cupin_RmlC_type.
IPR007247. Ureidogly_hydro.
IPR023525. Ureidogly_hydro_bac.
IPR024060. Ureidoglycolate_hydrolase_dom.
[Graphical view]
Gene3DG3DSA:2.60.120.480. G3DSA:2.60.120.480. 1 hit.
KOK01483.
PANTHERPTHR21221. Ureidogly_hydro. 1 hit.
PfamPF04115. Ureidogly_hydro. 1 hit.
[Graphical view]
PIRSFPIRSF017306. Ureidogly_hydro. 1 hit.
SUPFAMSSF51182. RmlC_like_cupin. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC6EKW0_ECOBD
AccessionPrimary (citable) accession number: C6EKW0
Secondary accession number(s): C5W0F9
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: November 16, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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