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C6EJR5 (C6EJR5_ECOBD) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.86 EMBL CAQ33048.1

Cryptic 6-phospho-beta-glucosidase EMBL ACT44385.1
EC=3.2.1.86 EMBL ACT44385.1

Glycoside hydrolase family 1 EMBL ACT28075.1
Gene names
Name:ascB EMBL ACT44385.1
Ordered Locus Names:B21_02531 EMBL CAQ33048.1, ECBD_1009 EMBL ACT28075.1, ECD_02566 EMBL ACT44385.1
OrganismEscherichia coli (strain B / BL21-DE3) [Complete proteome] [HAMAP]
Taxonomic identifier469008 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length474 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
   Molecular functionGlycosidase RuleBase RU004468 EMBL ACT44385.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_function6-phospho-beta-glucosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C6EJR5 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 25BCEBEF5D109F50

FASTA47454,011
        10         20         30         40         50         60 
MSVFPEGFLW GGALAANQSE GAFREGGKGL TTVDMIPHGE HRMAVKLGLE KRFQLRDDEF 

        70         80         90        100        110        120 
YPSHEATDFY HRYKEDIALM AEMGFKVFRT SIAWSRLFPQ GDELTPNQQG IAFYRSVFEE 

       130        140        150        160        170        180 
CKKYGIEPLV TLCHFDVPMH LVVEYGSWRN RKMVEFFTRY ARTCFEAFDG LVKYWLTFNE 

       190        200        210        220        230        240 
INIMLHSPFS GAGLVFEDGE NQDQVKYQAA HHELIASALA TKIAHEVNPQ NQVGCMLAGG 

       250        260        270        280        290        300 
NFYPYSCKPE DVWMALEKDR ENLFFIDVQA RGAYPSYSAR VFREKGVVIE KAEGDDEILK 

       310        320        330        340        350        360 
NTVDFVSFSY YASRCASADM NANNTNAANI VKSLKNPHIQ DSEWGWGIDP LGLRITMNMM 

       370        380        390        400        410        420 
YDRYQKPLFL VENGLGAKDE VNAQGEINDD YRISYLREHI RAMGEAIADG IPLMGYTTWG 

       430        440        450        460        470 
CIDLVSASTG EMSKRYGFVY VDRDDAGNGT LTRTRKKSFW WYKKVIASNG EDLE 

« Hide

References

« Hide 'large scale' references
[1]"Sequencing and gene expression analysis of Escherichia coli BL21(DE3)."
Krempl P.M., Mairhofer J., Eisenkolb M., Specht T., Leparc G.G., Kreil D.P., Bayer K., Striedner G.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BL21 EMBL CAQ33048.1.
[2]"Genome sequences of Escherichia coli B strains REL606 and BL21(DE3)."
Jeong H., Barbe V., Lee C.H., Vallenet D., Yu D.S., Choi S.H., Couloux A., Lee S.W., Yoon S.H., Cattolico L., Hur C.G., Park H.S., Segurens B., Kim S.C., Oh T.K., Lenski R.E., Studier F.W., Daegelen P., Kim J.F.
J. Mol. Biol. 394:644-652(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: B / BL21-DE3 [Korea] and BL21 EMBL ACT44385.1.
[3]"Sequencing and gene expression analysis of Escherichia coli BL21."
Leparc G., Striedner G., Bayer K., Kreil D., Krempl P.M.
Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: B / BL21-DE3 [Austria].
[4]"Complete sequence of Escherichia coli 'BL21-Gold(DE3)pLysS AG'."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K.M., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Sorek R., Rubin E.
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BL21-Gold EMBL ACT28075.1.
[5]"Complete sequence of Escherichia coli BL21(DE3)."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K.M., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Sorek R., Rubin E.
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: B / BL21-DE3 [JGI].
[6]Jeong H., Shim J.-H., Studier F.W., Oh T.K., Kim J.F.
Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BL21.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001665 Genomic DNA. Translation: ACT28075.1.
CP001509 Genomic DNA. Translation: ACT44385.1.
AM946981 Genomic DNA. Translation: CAQ33048.1.
RefSeqYP_003000304.1. NC_012892.2.
YP_003035260.1. NC_012947.1.
YP_003055156.1. NC_012971.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING469008.ECBD_1009.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT28075; ACT28075; ECBD_1009.
ACT44385; ACT44385; ECD_02566.
CAQ33048; CAQ33048; B21_02531.
GeneID8113557.
8156062.
8182163.
KEGGebd:ECBD_1009.
ebe:B21_02531.
ebl:ECD_02566.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2723.
HOGENOMHOG000088631.
KOK01223.
OMARDLFNEC.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6EJR5_ECOBD
AccessionPrimary (citable) accession number: C6EJR5
Secondary accession number(s): C5W827
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: July 9, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)