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C6EJI7 (C6EJI7_ECOBD) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:ECBD_2908 EMBL ACT29925.1, ECBD_3312 EMBL ACT30312.1
OrganismEscherichia coli (strain B / BL21-DE3) [Complete proteome] [HAMAP]
Taxonomic identifier469008 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length363 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains HTH lacI-type DNA-binding domain. SAAS SAAS028082

Sequences

Sequence LengthMass (Da)Tools
C6EJI7 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: 86628A47D03F3F5C

FASTA36338,903
        10         20         30         40         50         60 
MVNVKPVTLY DVAEYAGVSY QTVSRVVNQA SHVSAKTREK VEAAMAELNY IPNRVAQQLA 

        70         80         90        100        110        120 
GKQSLLIGVA TSSLALHAPS QIVAAIKSRA DQLGASVVVS MVERSGVEAC KAAVHNLLAQ 

       130        140        150        160        170        180 
RVSGLIINYP LDDQDAIAVE AACTNVPALF LDVSDQTPIN SIIFSHEDGT RLGVEHLVAL 

       190        200        210        220        230        240 
GHQQIALLAG PLSSVSARLR LAGWHKYLTR NQIQPIAERE GDWSAMSGFQ QTMQMLNEGI 

       250        260        270        280        290        300 
VPTAMLVAND QMALGAMRAI TESGLRVGAD ISVVGYDDTE DSSCYIPPLT TIKQDFRLLG 

       310        320        330        340        350        360 
QTSVDRLLQL SQGQAVKGNQ LLPVSLVKRK TTLAPNTQTA SPRALADSLM QLARQVSRLE 


SGQ 

« Hide

References

« Hide 'large scale' references
[1]"Complete sequence of Escherichia coli 'BL21-Gold(DE3)pLysS AG'."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K.M., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Sorek R., Rubin E.
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BL21-Gold EMBL ACT29925.1.
[2]"Complete sequence of Escherichia coli BL21(DE3)."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K.M., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Sorek R., Rubin E.
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: B / BL21-DE3 [JGI].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001665 Genomic DNA. Translation: ACT29925.1.
CP001665 Genomic DNA. Translation: ACT30312.1.
RefSeqYP_003037110.1. NC_012947.1.
YP_003037497.1. NC_012947.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING469008.ECBD_3312.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACT29925; ACT29925; ECBD_2908.
ACT30312; ACT30312; ECBD_3312.
GeneID8156215.
8156885.
KEGGebd:ECBD_2908.
ebd:ECBD_3312.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000220179.
OMAMTSISAR.
ProtClustDBPRK09526.

Family and domain databases

Gene3D1.10.260.40. 1 hit.
InterProIPR010982. Lambda_DNA-bd_dom.
IPR028082. Peripla_BP_I.
IPR000843. Tscrpt_reg_HTH_LacI.
[Graphical view]
PfamPF00356. LacI. 1 hit.
[Graphical view]
PRINTSPR00036. HTHLACI.
SMARTSM00354. HTH_LACI. 1 hit.
[Graphical view]
SUPFAMSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEPS00356. HTH_LACI_1. 1 hit.
PS50932. HTH_LACI_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6EJI7_ECOBD
AccessionPrimary (citable) accession number: C6EJI7
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: February 19, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)