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C6EDY1 (C6EDY1_ECOBD) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Chorismate--pyruvate lyase HAMAP MF_01632
Short name=CL HAMAP MF_01632
Short name=CPL HAMAP MF_01632
EC=4.1.3.40 HAMAP MF_01632
Gene names
Name:ubiC HAMAP MF_01632 EMBL ACT45702.1
Ordered Locus Names:B21_03871, ECBD_3994, ECD_03911
OrganismEscherichia coli (strain B / BL21-DE3) [Complete proteome] [HAMAP]
Taxonomic identifier469008 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length165 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway By similarity. SAAS SAAS007440 HAMAP MF_01632

Catalytic activity

Chorismate = 4-hydroxybenzoate + pyruvate. SAAS SAAS007440 HAMAP MF_01632

Pathway

Cofactor biosynthesis; ubiquinone biosynthesis. SAAS SAAS007440 HAMAP MF_01632

Subunit structure

Monomer By similarity. HAMAP MF_01632

Subcellular location

Cytoplasm By similarity SAAS SAAS007440 HAMAP MF_01632.

Sequence similarities

Belongs to the ubiC family. HAMAP MF_01632

Sequences

Sequence LengthMass (Da)Tools
C6EDY1 [UniParc].

Last modified September 1, 2009. Version 1.
Checksum: ED8A9825B963D9EF

FASTA16518,821
        10         20         30         40         50         60 
MSHPALTQLR ALRYFKEIPA LDPQLLDWLL LEDSMTKRFE QQGKTVSVTM IREGFVEQNE 

        70         80         90        100        110        120 
IPEELPLLPK ESRYWLREIL LCADGEPWLA GRTVVPVSTL SGPELALQKL GKTPLGRYLF 

       130        140        150        160 
TSSTLTRDFI EIGRDAGLWG RRSRLRLSGK PLLLTELFLP ASPLY

« Hide

References

[1]"Genome sequences of Escherichia coli B strains REL606 and BL21(DE3)."
Jeong H., Barbe V., Lee C.H., Vallenet D., Yu D.S., Choi S.H., Couloux A., Lee S.W., Yoon S.H., Cattolico L., Hur C.G., Park H.S., Segurens B., Kim S.C., Oh T.K., Lenski R.E., Studier F.W., Daegelen P., Kim J.F.
J. Mol. Biol. 394:644-652(2009) [PubMed: 19786035] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: B / BL21-DE3 [Korea].
[2]"Sequencing and gene expression analysis of Escherichia coli BL21."
Leparc G., Striedner G., Bayer K., Kreil D., Krempl P.M.
Submitted (JUN-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: B / BL21-DE3 [Austria].
[3]"Complete sequence of Escherichia coli BL21(DE3)."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., LaButti K.M., Clum A., Larimer F., Land M., Hauser L., Kyrpides N., Anderson I., Sorek R., Rubin E.
Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: B / BL21-DE3 [JGI].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001665 Genomic DNA. Translation: ACT30979.1.
CP001509 Genomic DNA. Translation: ACT45702.1.
AM946981 Genomic DNA. Translation: CAQ34388.1.

3D structure databases

ProteinModelPortalC6EDY1.
SMRC6EDY1. Positions 2-165.
ModBaseSearch...

Protein-protein interaction databases

STRINGC6EDY1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBESCT00000157181; EBESCP00000148421; EBESCG00000159114.
EBESCT00000188203; EBESCP00000178907; EBESCG00000187506.
EBESCT00000194882; EBESCP00000179435; EBESCG00000193990.
GenomeReviewsGene locus B21_03871 in contig AM946981_GR.
Gene locus ECD_03911 in contig CP001509_GR.
Gene locus ECBD_3994 in contig CP001665_GR.
KEGGebd:ECBD_3994.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000011008.
OMAGRTVIPQ.
ProtClustDBPRK11655.

Family and domain databases

HAMAPMF_01632. UbiC.
[Tree]
InterProIPR007440. Chorismate--pyruvate_lyase.
[Graphical view]
KOK03181.
PfamPF04345. Chor_lyase. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6EDY1_ECOBD
AccessionPrimary (citable) accession number: C6EDY1
Secondary accession number(s): C5WBS3
Entry history
Integrated into UniProtKB/TrEMBL: September 1, 2009
Last sequence update: September 1, 2009
Last modified: January 25, 2012
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info